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EMAGE:14644

Txn2 thioredoxin 2 ( MGI:1929468)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14644 EMAGE:14644 EMAGE:14644 EMAGE:14644 EMAGE:14644
"Pseudo-wholemount" of euxassay_005499. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_005499_01 euxassay_005499_02 euxassay_005499_03 euxassay_005499_04
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euxassay_005499_05 euxassay_005499_06 euxassay_005499_07 euxassay_005499_08 euxassay_005499_09
EMAGE:14644 EMAGE:14644 EMAGE:14644 EMAGE:14644 EMAGE:14644
euxassay_005499_10 euxassay_005499_11 euxassay_005499_12 euxassay_005499_13 euxassay_005499_14
EMAGE:14644 EMAGE:14644 EMAGE:14644 EMAGE:14644 EMAGE:14644
euxassay_005499_15 euxassay_005499_16 euxassay_005499_17 euxassay_005499_18 euxassay_005499_19
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euxassay_005499_20

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14644Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14644_wholemount_strong.wlz
14644_wholemount_moderate.wlz
14644_wholemount_weak.wlz
14644_wholemount_possible.wlz
14644_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14644_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T9614
Entity Detected:Txn2, thioredoxin 2 ( MGI:1929468)
Sequence:sense strand is shown

>T9614
GGAAGTGACAACAGGAGTGCCCTTGACGGGCAGGCCGGCTGGGCTCTGCATCCCTCTGCTCGCACTGCCG
GGAGATGGCTCAGCGGCTCCTCCTGGGGAGGTTCCTGACCTCAGTCATCTCCAGGAAGCCTCCTCAGGGT
GTGTGGGCTTCCCTCACCTCTAAGACCCTGCAGACCCCTCAGTACAATGCTGGTGGTCTAACAGTAATGC
CCAGCCCAGCCCGGACAGTACACACCACCAGAGTCTGTTTGACGACCTTTAACGTCCAGGATGGACCTGA
CTTTCAAGACAGAGTTGTCAACAGTGAGACACCAGTTGTTGTGGACTTTCATGCACAGTGGTGTGGCCCC
TGCAAGATCCTAGGACCGCGGCTAGAGAAGATGGTCGCCAAGCAGCACGGGAAGGTGGTCATGGCCAAAG
TGGACATTGACGATCACACAGACCTTGCCATTGAATATGAGGTGTCAGCTGTGCCTACCGTGCTAGCCAT
CAAGAACGGGGACGTGGTGGACAAGTTTGTGGGGATCAAGGACGAGGACCAGCTAGAAGCCTTCCTGAAG
AAGCTGATTGGCTGACGAGCAGAGAGGAGGCCTGACTACCCTTGCCTGCTGGAAGTCTGTTTTGGGGAGA
AGCCTAGTAGAACTCCCAGCCCTCAGCTGTCATCCTTCCTGCCCTGCCCCTCTGTTTTATCCTGGTGGGT
CTTGCCTGTGACAGCAGACCCTCCAAACCTAAGAGCCACCAGCACTTCAGAGCCAGCCCTCAGCCCGGGT
GGCCTGGAGAGGGCCAGTGCTGCCACTGGTGTGGGGGTCATTCTTGTGCACCCCCTACTGTGTGCTCCTC
TTGTGCACCTACTGTGTGCTTCTTCCGGGGCTTGTTGCCATTCCCCTAGATGCTGGAGAAAGCCTGGGCC
AGCCTGTAGCCTGACCGCACTAGTGGTCGCCCAGTCCCCATCTCTGTGGCCCTCTGAAGCCCCAGCCCCC
ATGCATCAGCCTCTGGCACATTTCCTCTCCTGCCTCTGCTTGAAAAGGAAACCAGAAGCCGAACAAGTGA
GAGTAATGTATAATTCTCTCATTTTTTTGTAGGTCTCTAATAAAGAACTTTATGTGGTCCTTCTACCTCT
TGCTGTGAAGAACAGAGCCCACCCCATAGCCTAAATCTGTCCCTTCTATTCCTTGTCCCCTCCCTGAGTT
AGCTGGGCCTTGGTTCTGGGTCCCTGAGCAGGAGGAGGAGCTGTGAACAAGTCAGACCAATAAAACCAGG
TTTGCACTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:30633447 using vector (pYX-Asc) specific primers. Forward Primer - name:RZPD T3, sequence:ATTAACCCTCACTAAAGGGA; Reverse Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:30633447 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14643 same embryo
 EMAGE:14642 same embryo
 EMAGE:14645 same embryo
 EMAGE:14647 same embryo
 EMAGE:14646 same embryo
 EurExpress:euxassay_005499 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS