Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:16618

Ppp2r2d protein phosphatase 2, regulatory subunit B, delta isoform ( MGI:1289252)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:16618 EMAGE:16618 EMAGE:16618 EMAGE:16618 EMAGE:16618
"Pseudo-wholemount" of euxassay_016814. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_016814_01 euxassay_016814_02 euxassay_016814_03 euxassay_016814_04
EMAGE:16618 EMAGE:16618 EMAGE:16618 EMAGE:16618 EMAGE:16618
euxassay_016814_05 euxassay_016814_06 euxassay_016814_07 euxassay_016814_08 euxassay_016814_09
EMAGE:16618 EMAGE:16618 EMAGE:16618 EMAGE:16618 EMAGE:16618
euxassay_016814_10 euxassay_016814_11 euxassay_016814_12 euxassay_016814_13 euxassay_016814_14
EMAGE:16618 EMAGE:16618 EMAGE:16618 EMAGE:16618 EMAGE:16618
euxassay_016814_15 euxassay_016814_16 euxassay_016814_17 euxassay_016814_18 euxassay_016814_19
EMAGE:16618 EMAGE:16618
euxassay_016814_20 euxassay_016814_21

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:16618Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
16618_wholemount_strong.wlz
16618_wholemount_moderate.wlz
16618_wholemount_weak.wlz
16618_wholemount_possible.wlz
16618_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:16618_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T63328
Entity Detected:Ppp2r2d, protein phosphatase 2, regulatory subunit B, delta isoform ( MGI:1289252)
Sequence:sense strand is shown

>T63328
GGTTCAGACAGTGCCATTATGACGGGGTCCTACAACAACTTCTTTAGAATGTTTGATAGAAACACTCGGA
GGGATGTTACACTGGAAGCCTCAAGAGAGAACAGCAAACCCCGAGCCAGCCTGAAGCCCCGGAAAGTATG
TACAGGGGGTAAGAGAAAGAAAGACGAGATTAGCGTGGACAGTTTGGACTTCAATAAGAAGATCCTCCAC
ACAGCCTGGCACCCCATGGAGAGCATTATTGCTGTAGCTGCCACCAATAACTTGTATATATTCCAGGACA
AAATTAATTAAGAAAACTGACTGGAGGACCAAGTGTTGTCTTGCATATGTACGCCGGTCAATTAGTTTTC
CTGTCAAAAAAGGCATTGTCCTCTCCA
Notes:The probe template was received by the EURExpress consortium as an aliquot of PCR product from the Allen Brain Atlas (originally amplified from wild type C57BL/6J mouse whole brain cDNA), and this was re-amplified using the gene-specific Allen Brain Atlas Primer Pair 148911. Forward Primer - name:148911_F_cDNA_Ppp2r2d, sequence:GGTTCAGACAGTGCCATTATGA; Reverse Primer - name:148911_N_SP6_cDNA_Ppp2r2d, sequence:TGGAGAGGACAATGCCTTTTT. The reverse primer contains a 5' extension containing an Sp6 RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using Sp6 polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:16616 same embryo
 EMAGE:16617 same embryo
 EMAGE:16615 same embryo
 EMAGE:16620 same embryo
 EMAGE:16614 same embryo
 EMAGE:16619 same embryo
 EurExpress:euxassay_016814 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS