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EMAGE:18256

Arhgap15 Rho GTPase activating protein 15 ( MGI:1923367)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:18256 EMAGE:18256 EMAGE:18256 EMAGE:18256 EMAGE:18256
euxassay_012031_01 euxassay_012031_02 euxassay_012031_03 euxassay_012031_04 euxassay_012031_05
EMAGE:18256 EMAGE:18256 EMAGE:18256 EMAGE:18256 EMAGE:18256
euxassay_012031_06 euxassay_012031_07 euxassay_012031_08 euxassay_012031_09 euxassay_012031_10
EMAGE:18256 EMAGE:18256 EMAGE:18256 EMAGE:18256 EMAGE:18256
euxassay_012031_11 euxassay_012031_12 euxassay_012031_13 euxassay_012031_14 euxassay_012031_15
EMAGE:18256 EMAGE:18256 EMAGE:18256 EMAGE:18256 EMAGE:18256
euxassay_012031_16 euxassay_012031_17 euxassay_012031_18 euxassay_012031_19 euxassay_012031_20
EMAGE:18256 EMAGE:18256 EMAGE:18256
euxassay_012031_21 euxassay_012031_22 euxassay_012031_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:18256Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
18256_wholemount_strong.wlz
18256_wholemount_moderate.wlz
18256_wholemount_weak.wlz
18256_wholemount_possible.wlz
18256_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:18256_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8373
Entity Detected:Arhgap15, Rho GTPase activating protein 15 ( MGI:1923367)
Sequence:sense strand is shown

>T8373
GTAAAAGGAGTTGATGGCAGTTTTAATAGCAAGTCACCATGGAGAAAAGGACAAGCTGCAGTGTGCAGAC
ATCTACAAACTGTGACAACTCTCTGGAAATACTGAATTCTGCCCACCAAGCTACAGGAGCTGTGCAAATG
AGAATCAAAAATGCCAACAGCCACCAAGACAGGCAGAGCCAAACTAAATCCATGATCCTCACCGATGCTG
GGAAGGTCACTGAACCTATTTCCCGGCACAGAAGGAATCATTCACAGCATGTGTTGAAAGATGTCATTCC
ACCACTAGAACATCCAATGGTTGAAAAAGAAGGGTATCTTCAAAAAGCCAAAATTGCAGATGGAGGAAAG
AAACTAAGGAAAAACTGGTCTACTTCCTGGATTGTTCTTTCTGGTCGAAAAATTGAATTTTACAAAGACT
CCAAGCAGCAAGCTCTTCCTAACATGAAAACCAGGCACAACGTGGAAAGTGTGGATTTGTGTGGTGCACA
TATAGAATGGGCCAAAGAAAAATCAAGCAGAAAGAGTGTCTTTCAGATCACAACAGTGTCAGGAAATGAG
TTCCTTCTACAGTCAGATATTGACTTCCTCATATTGGATTGGTTCCAAGCTATCAAAAATGCAATTGACA
GATTGCCAAAGAATCCAAGTTGTGGGTCCCTGGAGTTGTTCAATTTGCAGAGATCCTCAAGTTCTGAACT
GCCGAGTCACTGCCACATCGATAGAAAAGAACAGAAACCAGAACACAGGAAGTCCTTCATGTTTCGACTG
CACCACAGTGCTTCTGATACAAGTGACAAGAATCGCGTGAAGAGCAGACTGAAGAAGTTCATCTCCAGAA
GACCTTCTCTGAAAACTTTGCAGGAAAAGGGACTCATTAAAGATCAAATTTTTGGCTCTCATCTGCACAC
AGTGTGTGAACGAGAACATTCCACAGTTCCATGGTTTGTAAAGCAATGCATTGAAGCTGTTGAAAAAAGA
GGCCTAGACGTTGATGGAATTTATCGAGTTAGTGGCAATCTTGCAACAATACAGAAGTTAAGATTTATTG
TCAACCAAGAAGAGAAGCTGAATTTGGATGACAGCCAGTGGGAGGACATCCACGTCGTCACCGGAGCACT
GAAGATGTTTTTCCGGGAGCTGTCTGAACCGCTCTTCCCTTACAGTTTCTTTGAGCGGTTTGTGGAGGCG
ATCAAAAAACAAGACAGCAATGAAAAAATTGAAACTATGAGGTCTCTGGTAAAACGTCTCCCTCCACCAA
ATCATGATACCATGAAAATCCTCTTCAGACATCTAACCAAGATAGTGGCCAAAGCCTCCCAGAATCTCAT
GTCCACCCAAAGCTTGGGGATTGTGTTTGGACCCACCCTTCTGCGAGCGGAAAATGAGTCAGGGAATGTA
GCGGTCCACATGGTATACCAAAACCAGATAGCAGAGTTCATGCTGACTGAGTACGATAAGATCTTCAGCT
CAGAGGAAGACTGACAGCCGAGACGAGCTACTGAGTATGTTCACATCTGTCTTGATGCCTAATATTTTTA
CATTTCTGTAAACATATTTCTGAAATATTTTTTCCTTCCAAGCGACAGATGCTTCATTTTGTGAAAACTT
AGTGATGATTTTGTATTTAAGTTCCAAACATTCGAATAAAATAAATGACAATAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3468639 using vector (pT7T3D-PacI) specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3468639 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:18257 same embryo
 EMAGE:18255 same embryo
 EMAGE:18252 same embryo
 EMAGE:18253 same embryo
 EMAGE:18251 same embryo
 EMAGE:18254 same embryo
 EurExpress:euxassay_012031 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS