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EMAGE:18257

Slc25a47 solute carrier family 25, member 47 ( MGI:2144766)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:18257 EMAGE:18257 EMAGE:18257 EMAGE:18257 EMAGE:18257
euxassay_012040_01 euxassay_012040_02 euxassay_012040_03 euxassay_012040_04 euxassay_012040_05
EMAGE:18257 EMAGE:18257 EMAGE:18257 EMAGE:18257 EMAGE:18257
euxassay_012040_06 euxassay_012040_07 euxassay_012040_08 euxassay_012040_09 euxassay_012040_10
EMAGE:18257 EMAGE:18257 EMAGE:18257 EMAGE:18257 EMAGE:18257
euxassay_012040_11 euxassay_012040_12 euxassay_012040_13 euxassay_012040_14 euxassay_012040_15
EMAGE:18257 EMAGE:18257 EMAGE:18257 EMAGE:18257 EMAGE:18257
euxassay_012040_16 euxassay_012040_17 euxassay_012040_18 euxassay_012040_19 euxassay_012040_20
EMAGE:18257 EMAGE:18257 EMAGE:18257 EMAGE:18257
euxassay_012040_21 euxassay_012040_22 euxassay_012040_23 euxassay_012040_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:18257Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
18257_wholemount_strong.wlz
18257_wholemount_moderate.wlz
18257_wholemount_weak.wlz
18257_wholemount_possible.wlz
18257_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:18257_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T10027
Entity Detected:Slc25a47, solute carrier family 25, member 47 ( MGI:2144766)
Sequence:sense strand is shown

>T10027
AGTGTGGCATTGGCAGTAACACCGGAAACCTTCTCATTTTCTGTGCTGTCCATGGATTTTGTTGCTGGGG
CCATTGGAGGAGTCTGCGGTGTTGCTGTGGGCTACCCTCTGGATACAGTGAAGGTCAGAATCCAGACGGA
GGCCAAATACGCTGGCATCTGGCACTGCATCCGGGACACGTATCGTCAAGAGCGGGTGTGGGGCTTCTAC
AGGGGCCTCTCACTGCCCGTGTGCACAGTGTCCCTGGTGTCGTCTGTATCTTTTGGTACCTACCACCACT
GCCTGGCTCACATCTGCCGCTTCCGGTACGGCAGCACGGACGCCAAGCCCACCAAGGCTGATATCACACT
CTCAGGATGTGCCTCTGGTCTTGTCCGGGTGTTCCTGACGTCACCCACTGAGGTGGCCAAAGTCCGCCTG
CAGACACAGACCCAAGCTCAGACACAGCAGCGGCGGTCCTCGGCCTCCTGGACATCTGGGGCTCCCGCTT
TGTGTCCCACACCCACTGCTTGCTTGGAGCCCAGGCCTAAGTACAGTGGGCCACTGCACTGTTTAGTCAC
AGTGGCTCGAGAGGAGGGGCTTCGGGGACTCTACATGGGCAGCTCGGCTCTGCTCCTTCGTGAGGGTCAC
TCCTTTGCCACCTACTTTCTCTCCTATGCTATGCTCTGCGAGTGGCTCACCCCTGCTGGCCATAGTCAGC
CAGATGTCTTAGGTGTGTTGGTGGCTGGAGGCTGCGCTGGGGTCCTGGCCTGGGCCGTGGCCACCCCCAT
GGATGTGATCAAGTCACGCCTGCAGGCGGATGGGCAGGGCCAGCATCGCTACCGGGGCCTCCTGCACTGT
GTGGTGACCAGTGTACGGGAGGAGGGTCCCAGGGTGCTCTTCAAGGGACTGGCACTCAACTGCTGTCGTG
CCTTTCCTGTTAACATGGTGGTCTTTGTGGCGTATGAGGCTGTGCTGAGGCTCACGCAGAGCCTGCTCAC
ATAGGCACCAGTCAGCAACATCCACGTCACACAGCAGCCGGAGGCAAAGGGGAGAACGGGTAGGCTCAGG
AGCCCACGGGGCTGTCACCAGAGCAGCAGAGGACCTTCTGTGCTGTGACTGAGGGGAGGCCTGAGCTCGG
ACAGCCCAGCTGCTGACCACAAAATCAGGGAGTTGATCTGCCATCTGCTTGGGGGTCATGAGTCAGGATT
GTGTGGGTCTGCTTGATGAGGACATGTGTCACTTGGAGTCATTTTCACCGAACAAAGAACTGTTCATTCC
TGCTTGTACTGCCATGCCCATTTCAGAGCATACCTTCACCAACCCCTCTGGGTGCTAGGCCAACCTCGAA
ACCCAGTTCTACTCAGCATCCACCGATTCACTGTCCCTTTAGAGACAGGCTAGGGACCAGACAGCAAGCT
GGTTACATCTGACTACAGGCTGGGCTGGTTCCCTGTCCTAGGCTACTCAGAGGACCGAGGAATCGGTGCA
GGGCATCACCATCGCATACCCACACCACCTGTAGGTGCTGTGCTGGCCACATGAAGATCCTGGAACCTGG
GTCAGGGGTGGCTGTTAATAAATGTTTCTGTGGTTGCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6760348 using vector (pDONR 201) specific primers. Forward Primer - name:T7-pDONR 201-fw, sequence:CGTAATACGACTCACTATAGGGCTCGCGTTAACGCTAGCATGGAT; Reverse Primer - name:T3-pDONR 201-rv, sequence:CAAATTAACCCTCACTAAAGGGGTGCAATGTAACATCAGAGA. Anti-sense probe was then transcribed from the PCR amplified template using T3 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6760348 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:18256 same embryo
 EMAGE:18255 same embryo
 EMAGE:18252 same embryo
 EMAGE:18253 same embryo
 EMAGE:18251 same embryo
 EMAGE:18254 same embryo
 EurExpress:euxassay_012040 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS