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EMAGE:19360

Hdgfrp2 hepatoma-derived growth factor, related protein 2 ( MGI:1194492)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:19360 EMAGE:19360 EMAGE:19360 EMAGE:19360 EMAGE:19360
"Pseudo-wholemount" of euxassay_002164. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_002164_01 euxassay_002164_02 euxassay_002164_03 euxassay_002164_04
EMAGE:19360 EMAGE:19360 EMAGE:19360 EMAGE:19360 EMAGE:19360
euxassay_002164_05 euxassay_002164_06 euxassay_002164_07 euxassay_002164_08 euxassay_002164_09
EMAGE:19360 EMAGE:19360 EMAGE:19360 EMAGE:19360 EMAGE:19360
euxassay_002164_10 euxassay_002164_11 euxassay_002164_12 euxassay_002164_13 euxassay_002164_14
EMAGE:19360 EMAGE:19360 EMAGE:19360 EMAGE:19360
euxassay_002164_15 euxassay_002164_16 euxassay_002164_17 euxassay_002164_18

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:19360Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
19360_wholemount_strong.wlz
19360_wholemount_moderate.wlz
19360_wholemount_weak.wlz
19360_wholemount_possible.wlz
19360_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:19360_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6032
Entity Detected:Hdgfrp2, hepatoma-derived growth factor, related protein 2 ( MGI:1194492)
Sequence:sense strand is shown

>T6032
CTTCGCCTCTCACCGCCGTTGCTGCTTCCCGCGGCCTGGGCCTCCGCCGACAGCATGCCGCACGCCTTCA
AGCCCGGGGACTTGGTGTTTGCCAAGATGAAGGGCTACCCGCACTGGCCGGCCCGGATTGATGACATTGC
TGATGGTGCCGTGAAGCCCCCACCCAACAAATACCCCATCTTCTTCTTTGGAACGCATGAAACGGCCTTC
CTGGGACCCAAGGACCTGTTCCCCTATGATAAGTGCAAGGACAAGTACGGAAAGCCCAACAAGAGGAAAG
GCTTCAATGAGGGGCTCTGGGAGATCCAGAACAACCCCCATGCCAGCTACAGTGCGCCTCCGCCGGTGAG
CTCCTCTGACAGTGAGGCCCCTGAAGCCGACCTGGGTTGTGGCAGCGACGTGGACAAGGACAAAGAATCC
CGGAGGGTCATGACTGTGACAGCTGTGACCACCACAGCCACCAGTGACAGGATGGAGAGCGATTCTGACT
CTGACAAGAGCAGTGATCACAGTGGCCTGAAGCGGAAGACACCAGTCTTGAAGGTGTCAGTCTCTAAACG
AGCTAGAAGAGCTTCCAGTGACCTGGATCAGGCCAGTGTGTCCCCATCAGAAGAGGACTCTGAGAGCCCA
TCTGAGTCGGAGAAGACCAGTGACCAGGATTTTACCCCAGAGAAGAAGACAGCGGCCCGGCCGCCACGGC
GAGGTCCTCTGGGAGGACGCAAGAAGAAGCACCCCACTGGCTATGCCTGTCCCCAGAAGGTGCCATCAGC
CTCGGATTCAGACTCCAAAGCCGACTCAGATGGGGCCAAGGAGGAGCCTGTGGTTACAGCACAGCCGTCT
CCATCCTCCTCGTCGTCGTCCTCATCATCATCCTCCTCAGACTCAGATGTGTCTGTCAAGAAACCCCCTC
GAGGTAGAAAGCCAGCTGAGAAGCCACCCCCAAAACCCCGAGGGCGGAGACCAAAGCCAGAACGACCACC
TTCCACCTCCAGCAGTGACAGTGACAGTGACAGTGGTGAAGTAGACCGCATCAGTGAATGGAAGAGACGT
GATGAAGAGCGAAGGCGTGAGCTGGAGGCTCGGAGGCGACGGGAGCAGGAGGAAGAGCTCCGGAGACTTC
GAGAACAGGAGAGGGAGGAGAAGGAGCGGCGCAAGGAGCGGGCAGAGCGTGGGGGCAGCAGTGGAGAGGA
GCTGGAGGACGAGGAGCCTGTGAAGAAGCGTAGCCGAAAGGCTCGAGGCCGAGGCACACCATCCTCCTCT
GACTCAGAACCTGAGGGGGAGCTTGGGAAAGAGGGGAAGAAGTTGGCCAAGAAGTCCCAACTGCCAGGCT
CAGAGTCTGCAAGGAAGCCTGGGCAAAAGGAGAAGAGAGGGCGGCCAGATGAGAAGCCACGAGCCAGGCC
TGTGAAGGTGGAGCGGACGCGGAAGCGGTCAGAGGGTCTCTCACTGGAAAGGAAGGGGGAGAAGAAGAAA
GAACCCTCCGTAGAGGAGAGACTGCAAAAGCTGCACAGCGAGATCAAATTTGCACTGAAGGTTGACAACC
CAGATGTGAGGAAGTGTCTGAGTGCACTGGAAGAACTGGGGACTCTGCAGGTAACCTCTCAGATTCTTCA
GAAGAACACAGATGTGGTAGCAACGCTGAAGAAGATTCGCCGGTACAAGGCCAACAAGGATGTGATGGCG
AAGGCAGCAGAGGTCTACACCCGGCTCAAGTCACGGGTCCTGGGGCCGAAAGTTGAGGCTCTCCAGAAGG
TGAACAAGGCTGGAGCCGAGAAGGAACGGGCCGATAACGAGAAGCTAGAGGAGCAGCCGGGGGAGCAGGC
TCCCAGAGAGCTGGCAGAGGATGAGCCCAGCACCGATCGGTCAGCACCTGTGAATGGTGAGGCCACATCC
CAGAAGGGGGAGAACATGGAAGACAGAGCACAGGAAGACGGGCAGGACTCTGAAGATGGCCCCAGGGGTG
GCTCCTCAGAAGAGCTGCATGACAGCCCACGCGACAACTCGGACCCAGCCAAGCCTGGAAATGAGCGTCA
GGACCATGAGAGGACACGGCTGGCCTCTGAGTCTGCCAATGATGACAATGAGGACAGCTGAGCTCCAGCC
ACTGTGGCCATGGTGCCATGTCCATCCCCAGCCTCCCAGGGAAGTGCTGCGCTGTTTGTATTTGTGGTCT
GGGCTTTTCTGCCTAGTTCTGTGATTTCAATTGACATGAAATGGCTATAAAGAATTTTGTAATGAAAAAA
AAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3488803 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3488803 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:19364 same embryo
 EMAGE:19359 same embryo
 EMAGE:19361 same embryo
 EMAGE:19362 same embryo
 EMAGE:19363 same embryo
 EurExpress:euxassay_002164 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS