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EMAGE:19506

Ran RAN, member RAS oncogene family ( MGI:1333112)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:19506 EMAGE:19506 EMAGE:19506 EMAGE:19506 EMAGE:19506
euxassay_004894_01 euxassay_004894_02 euxassay_004894_03 euxassay_004894_04 euxassay_004894_05
EMAGE:19506 EMAGE:19506 EMAGE:19506 EMAGE:19506 EMAGE:19506
euxassay_004894_06 euxassay_004894_07 euxassay_004894_08 euxassay_004894_09 euxassay_004894_10
EMAGE:19506 EMAGE:19506 EMAGE:19506 EMAGE:19506 EMAGE:19506
euxassay_004894_11 euxassay_004894_12 euxassay_004894_13 euxassay_004894_14 euxassay_004894_15
EMAGE:19506 EMAGE:19506 EMAGE:19506 EMAGE:19506 EMAGE:19506
euxassay_004894_16 euxassay_004894_17 euxassay_004894_18 euxassay_004894_19 euxassay_004894_20
EMAGE:19506 EMAGE:19506 EMAGE:19506 EMAGE:19506
euxassay_004894_21 euxassay_004894_22 euxassay_004894_23 euxassay_004894_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:19506Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
19506_wholemount_strong.wlz
19506_wholemount_moderate.wlz
19506_wholemount_weak.wlz
19506_wholemount_possible.wlz
19506_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:19506_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6896
Entity Detected:Ran, RAN, member RAS oncogene family ( MGI:1333112)
Sequence:sense strand is shown

>T6896
CCGGCATTTGAATCGCGCTTCCGCCATCTTTCCAGCTCCAGTCGGACAGGCGCGGAGACTCTTCTGGAAG
GATCCGCCGCGATGGCCGCCCAGGGAGAGCCGCAGGTCCAGTTCAAGCTCGTCCTGGTGGGCGACGGCGG
CACCGGGAAGACAACCTTCGTGAAGCGCCACTTGACGGGCGAGTTTGAGAAGAAGTATGTAGCCACCCTG
GGCGTGGAGGTGCACCCGCTCGTCTTCCATACCAACAGAGGACCCATCAAGTTCAACGTGTGGGACACGG
CCGGCCAGGAGAAGTTCGGGGGCCTGCGCGATGGCTACTACATCCAAGCCCAGTGTGCCATTATAATGTT
TGATGTAACCTCAAGAGTTACTTACAAGAATGTACCTAACTGGCATAGAGATCTGGTACGAGTGTGTGAA
AACATCCCCATTGTATTGTGTGGCAACAAAGTGGATATTAAAGACAGGAAAGTGAAGGCAAAATCTATTG
TCTTCCACCGGAAGAAGAATCTTCAGTACTATGACATTTCTGCCAAAAGTAACTACAACTTTGAAAAGCC
TTTCCTCTGGCTTGCCAGAAAGCTCATTGGAGATCCTAACTTGGAGTTTGTTGCCATGCCTGCTCTTGCC
CCACCTGAGGTGGTCATGGACCCAGCTTTGGCAGCACAGTACGAGCATGATTTAGAGGTTGCTCAGACGA
CTGCTCTCCCAGATGAGGATGATGACCTGTGAGAAAGTGAAGCTGGAGCCCTGCGTCAGAAGTCTAGTTT
TATAGGCAACTGTCCTGTGATGTCAGCGGTGCAGCGCGTGTGCCACCTTATTTAGCTAAGCAGATCGTGT
ACTTCATTGGGATGCTGAAGGAGATGAATGGGCTTCGAGTGAATGTGGCAGTTAAACATACCTTCATTTT
TTGGACTTGCATATTTAGCTGTTTGGAACAGAGTTGTTTCCTTTCTGAATTTCAAAGATAAGACTGCTGC
AGTCCCATCGCAATATCCAGTGGGGAAATCTTGTTTGTTACTGTCATTCCCATTCTTTTCGTTTAGAATC
AGAATAAAGTTGTATTTCAAATAATCTAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3968440 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3968440 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:19508 same embryo
 EMAGE:19507 same embryo
 EMAGE:19505 same embryo
 EMAGE:19510 same embryo
 EMAGE:19509 same embryo
 EurExpress:euxassay_004894 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS