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EMAGE:19562

Hyal3 hyaluronoglucosaminidase 3 ( MGI:1330288)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:19562 EMAGE:19562 EMAGE:19562 EMAGE:19562 EMAGE:19562
euxassay_004859_01 euxassay_004859_02 euxassay_004859_03 euxassay_004859_04 euxassay_004859_05
EMAGE:19562 EMAGE:19562 EMAGE:19562 EMAGE:19562 EMAGE:19562
euxassay_004859_06 euxassay_004859_07 euxassay_004859_08 euxassay_004859_09 euxassay_004859_10
EMAGE:19562 EMAGE:19562 EMAGE:19562 EMAGE:19562 EMAGE:19562
euxassay_004859_11 euxassay_004859_12 euxassay_004859_13 euxassay_004859_14 euxassay_004859_15
EMAGE:19562 EMAGE:19562 EMAGE:19562 EMAGE:19562 EMAGE:19562
euxassay_004859_16 euxassay_004859_17 euxassay_004859_18 euxassay_004859_19 euxassay_004859_20
EMAGE:19562 EMAGE:19562 EMAGE:19562 EMAGE:19562
euxassay_004859_21 euxassay_004859_22 euxassay_004859_23 euxassay_004859_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:19562Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
19562_wholemount_strong.wlz
19562_wholemount_moderate.wlz
19562_wholemount_weak.wlz
19562_wholemount_possible.wlz
19562_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:19562_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6560
Entity Detected:Hyal3, hyaluronoglucosaminidase 3 ( MGI:1330288)
Sequence:sense strand is shown

>T6560
CTGGGGAGGGTGTACTGTGTCTGCGGAGCCACCTGAGCCAGGTCTCCATCTCTGTGGCATGATCATGCAC
CTAGGCCTAATGATGGTGGTGGGGTTAACCCTGTGCCTGATGCATGGCCAAGCTTTGCTGCAGGTTCCTG
AACATCCTTTTTCTGTGGTATGGAATGTACCCTCAGCAAGATGTAAGGCCCATTTTGGTGTGCATCTGCC
TCTCGATGCCCTCGGCATTGTAGCCAACCACGGCCAACATTTTCACGGCCAAAACATCTCCATCTTCTAC
AAGAACCAGTTTGGTCTTTATCCTTACTTTGGACCTAGAGGTACAGCCCACAATGGGGGAATCCCTCAGG
CTGTGTCCTTAGACCACCACTTGGCACGAGCTGCCCACCAGATCCTACACAGCCTAGGATCTAGCTTTGC
TGGCTTGGCAGTGCTGGACTGGGAAGAATGGTACCCACTCTGGGCTGGGAACTGGGGCCCCCATCGACAA
GTCTACCTGGCAGCCTCCTGGGTTTGGACACAGCAGATGTTCCCTGGCTTGGATCCTCAGGAACAGCTCC
ACAAAGCCCATACTAGCTTTGAGCAGGCTGCCCGTGCACTCATGGAATACACTCTGCAGCTGGGCCGGAC
ACTTCGCCCGAGTGGCCTCTGGGGCTTTTACAGATATCCAGCCTGTGGCAATGGCTGGCATAAGATGGCT
TCCAACTACACAGGCCACTGCCATGCAGCCATCACCACCCAAAACACCCAACTGCGTTGGCTCTGGGCTG
CCTCCAGTGCTCTCTTCCCTAGCATCTACCTCCCACCCAGACTGCCACTTGCCTACCGTCAGGCCTTTGT
CCGACACCGCCTGGAGGAAGCCTTCCGTGTAGCCCTTTTGGAGCATTCACATCCTCTACCTGTTCTGGCT
TATTCTCGCCTCACACACCGGAGCTCTGGGAGATTCCTGTCTCTGGACGACCTGATGCAGACTATTGGAG
TGAGTGCCGCACTGGGAACAGCTGGAGTGGTACTCTGGGGGGACCTGAGCTTCTCTAGCTCTGAGGAAAA
GTGCTGGCGTCTCCATGACTACTTAGTGGGCACTTTAGGCCCCTATGTGATCAATGTGACCAAGGCTGAC
ATGGCTTGCAGTCACCAGCGATGTCATGGCCATGGTCGATGTGCCCGGAAAGACCCAGGACAAATGGAAG
CCTTTCTACATCTGCAGCCAGATGACAGTCTTGGAGCTTGGAATTCCTTCAGATGCCATTGTTATTCGGG
TTGGGCTGGCCCTACCTGCCTGGAGCCTAAACCCTGAGCCCAACATAGAGTCAGGAGTCCCTGCCTTTGC
TACTTGACCCTGCTGTCATTTTCCCAGTCCTAGAGGAATTCCCCTTTATGCTTTGTTTAGCTTATGGGAC
TTTCCCAAGTACATATCCCACTTCCACCAATACAACTTCCATAGAAATTCCTGAGGAGCCGGGCATGGTG
GCGCACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCCGATTTCTGAGTTCGAGGCCAGCCTGAT
CTACAAAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAATCCTGTCTCAGAAAAAAAAAAAAAAAAA
AAAAA
Notes:The probe template was PCR amplified from IMAGE:3592874 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3592874 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:19566 same embryo
 EMAGE:19561 same embryo
 EMAGE:19564 same embryo
 EMAGE:19563 same embryo
 EMAGE:19565 same embryo
 EurExpress:euxassay_004859 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS