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EMAGE:21577

Mta3 metastasis associated 3 ( MGI:2151172)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:21577 EMAGE:21577 EMAGE:21577 EMAGE:21577 EMAGE:21577
euxassay_003196_01 euxassay_003196_02 euxassay_003196_03 euxassay_003196_04 euxassay_003196_05
EMAGE:21577 EMAGE:21577 EMAGE:21577 EMAGE:21577 EMAGE:21577
euxassay_003196_06 euxassay_003196_07 euxassay_003196_08 euxassay_003196_09 euxassay_003196_10
EMAGE:21577 EMAGE:21577 EMAGE:21577 EMAGE:21577 EMAGE:21577
euxassay_003196_11 euxassay_003196_12 euxassay_003196_13 euxassay_003196_14 euxassay_003196_15
EMAGE:21577 EMAGE:21577 EMAGE:21577 EMAGE:21577 EMAGE:21577
euxassay_003196_16 euxassay_003196_17 euxassay_003196_18 euxassay_003196_19 euxassay_003196_20
EMAGE:21577 EMAGE:21577 EMAGE:21577 EMAGE:21577
euxassay_003196_21 euxassay_003196_22 euxassay_003196_23 euxassay_003196_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:21577Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
21577_wholemount_strong.wlz
21577_wholemount_moderate.wlz
21577_wholemount_weak.wlz
21577_wholemount_possible.wlz
21577_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:21577_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4871
Entity Detected:Mta3, metastasis associated 3 ( MGI:2151172)
Sequence:sense strand is shown

>T4871
GGCTGAGGCGGCGGCGGCGGGCGGGGCTCGGCTCGGGCTCCGCGGGCGGGCGGGCGGACATGGCGGCCAA
CATGTACCGGGTCGGAGACTACGTTTATTTTGAGAATTCCTCCAGCAACCCGTACCTCATCAGACGGATA
GAGGAGCTCAACAAGACTGCAAGTGGCAATGTGGAAGCAAAAGTCGTCTGCTTTTACAGAAGACGGGACA
TCTCCAACACGCTTATCATGCTCGCCGACAAGCATGCTAAAGAAACTGAGGAGGAGTCGGAGACGCCAGT
TGAGGCCGACTTGACGGAGAAGCAGAAGCACCAGCTGAAACACAGGGAGCTCTTTCTGTCGCGCCAGTAC
GAGTCACTGCCTGCGACACATATCAGGGGGAAGTGCAGCGTGGCCCTGCTGAATGAGACAGAATCCGTGT
TGTCATACCTTGACAAGGAGGATACCTTCTTCTACTCACTGGTATACGACCCTTCAGTGAAAACATTATT
GGCTGACAAAGGTGAAATCAGAGTGGGCCCAAAGTACCAAGCTGACATTCCAGACATGCTACCAGAAGGA
GACTCAGATGAGAGGGAACAATCAAAATTGGAAGTTAAGGTTTGGGACCCCAATAGCCCACTTACGGATC
GACAGATTGACCAGTTTTTAGTTGTAGCCCGTGCCGTGGGAACATTTGCCCGAGCCCTGGACTGCAGCAG
CTCCGTGAGGCAACCCAGCCTTCACATGAGTGCAGCCGCAGCCTCCCGAGACATCACCTTGTTTCATGCC
ATGGACACACTGTACAGGCACGGCTATGACCTCAGCAGCGCCATCAGTGTGCTGGTGCCGCTCGGAGGGC
CAGTCCTCTGCAGGGACGAGATGGAGGAGTGGTCGGCCTCTGAAGCCTGCCTATTCGAAGAAGCACTGGA
AAAATACGGCAAAGATTTCAACGACATTCGTCAGGACTTTCTCCCGTGGAAATCCTTGACTAGCATCATT
GAATATTATTACATGTGGAAAACTACTGACAGATACGTGCAGCAGAAGCGCCTAAAGGCCGCAGAAGCCG
AGAGCAAACTGAAACAAGTGTACATCCCGACTTACAAACCAAATCCCAACCAAATCTCCAGCAGCAACGG
CAAGGCTGGCACTGTGAATGGAGCTGTGGGGACCCAGTTTCAGCCCCAGAGCGCCCTCCTAGGGCGAGCC
TGCGAGAGCTGCTACGCCACACAGTCTCATCAGTGGTATTCCTGGGGCCCACCTAACATGCAGTGTAGAC
TCTGCGCGACCTGTTGGCTGTATTGGAAAAAGTATGGAGGTCTGAAAATGCCTACCCAGTCAGACGAAGA
GAAGTCTCCCAGCCCGACTGCAGAGGACCCGCGCGCAAGAAGCCACATGTCCCGGCAGGCCTTGCAGGGC
ATGCCGGTCCGGAACACCGGAAGCCCCAAGTCTGCAGTGAAGACCCGCCAAGCTTTCTTCCTTCGTACTA
CGTATTTCACAAAAATTGCTCGTCAGGTCTGCAAAAGCACCCTGCGGCTGCGGCAGGCAGCGAGACGGCC
GTTTGTTGCTATTAATTATGCTGCCATTAGGGCAGAATGTAAGACGCTTTTCAATTCTTAACCTTCCGCG
TTCCGCTCCTTGCCATCCTCTCTCTCCCTCGCTCTCTCTTTTTGTTTGTTTGTTTGCAATAAACATAAGT
TCTTGTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5097283 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5097283 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_003196 same experiment
 EMAGE:21580 same embryo
 EMAGE:21575 same embryo
 EMAGE:21578 same embryo
 EMAGE:21579 same embryo
 EMAGE:21576 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS