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EMAGE:29749

Slc7a5 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 ( MGI:1298205)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:29749
euxassay_003902_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7315
Entity Detected:Slc7a5, solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 ( MGI:1298205)
Sequence:sense strand is shown

>T7315
CCACGCGTCCGCCCACGCGTCCGGTACGCGGAGAGCGGCTCGGCCGCGCGCACGCCGGGTATCCAGGCCG
AGCCGGGAACGCCGAGAGCATGGCGGTCGCGGGCGCCAAGAGGCGCGCGGTTGCGACCCCGGCGGCGGCG
GCGGCGGAGGAGGAGCGGCAGGCGCGGGAGAAGATGTTGGAGGCGCGGCGCGGGGACGGCGCGGACCCCG
AGGGCGAAGGCGTGACCCTGCAGCGCAATATCACGCTGCTCAACGGTGTGGCCATCATCGTGGGCACCAT
CATCGGCTCTGGCATCTTCGTGACGCCCACCGGCGTGCTCAAGGAAGCGGGGTCGCCCGGACTGTCGCTC
GTGGTGTGGGCTGTGTGCGGCGTCTTCTCCATCGTGGGCGCACTCTGCTACGCGGAGCTGGGCACCACCA
TCTCCAAGTCGGGCGGCGACTACGCCTACATGCTGGAGGTCTACGGCTCGTTGCCCGCCTTCCTCAAGCT
CTGGATCGAGCTGCTCATCATTCGGCCCTCCTCGCAGTACATCGTGGCGCTGGTCTTCGCCACCTACTTG
CTCAAGCCGGTCTTCCCCACTTGTCCGGTGCCCGAGGAAGCTGCCAAGCTCGTGGCCTGCCTCTGCGTGC
TGCTCCTCACAGCTGTGAACTGCTACAGCGTGAAGGCTGCGACCCGTGTGCAGGACGCCTTTGCGGCTGC
CAAGCTGCTGGCCCTGGCCCTCATCATTTTGCTCGGCTTCATCCAGATGGGGAAGGACATGGGACAAGGT
GATGCGTCCAACCTGCAGCAGAAGTTGTCCTTTGAAGGCACCAATCTGGACGTGGGGAACATTGTGTTGG
CTTTGTACAGCGGCCTCTTCGCCTACGGAGGATGGAACTATCTGAATTTTGTCACGGAGGAGATGATCAA
CCCCTACAGGAACCTGCCCCTGGCCATCATCATCTCCTTGCCCATTGTCACACTGGTCTATGTGCTGACG
AACCTGGCCTATTTCACTACCCTCTCTACCAACCAGATGCTGACATCTGAAGCTGTGGCTGTGGACTTCG
GGAACTACCACTTGGGTGTCATGTCCTGGATCATTCCTGTCTTTGTGGGCTTGTCTTGCTTCGGCTCTGT
CAATGGGTCTCTGTTCACGTCCTCAAGACTGTTCTTCGTGGGATCCAGGGAGGGCCACCTGCCTTCTGTC
CTCTCCATGATCCACCCACAGCTGCTGACACCTGTGCCATCACTGGTGTTCACGTGTATAATGACGCTGA
TGTACGCCTTCTCCAGAGATATCTTCTCCATCATCAACTTCTTCAGCTTCTTCAACTGGCTGTGTGTGGC
CCTGGCCATCATCGGTATGATGTGGCTCCGATTCAAGAAGCCTGAGCTGGAGCGTCCCATCAAGGTGAAT
CTGGCCCTCCCGGTGTTCTTTATCCTGGCCTGCCTCTTCCTCATTGCCGTGTCATTCTGGAAGACACCCA
TGGAGTGTGGCATTGGCTTCGCCATCATCCTCAGCGGGCTGCCTGTCTACTTCTTTGGTGTCTGGTGGAA
GAACAAGCCCAAGTGGATTCTGCAGGCTATCTTCTCTGTGACGGTGCTCTGCCAGAAGTTGATGCAGGTG
GTACCTCAGGAGACTTAGTCACGTGTCCTGGGTGCTGCCGCGCTGTGCCTGCTCCAGACAACTCTCCTTC
GGAAGATCAGTGGCCAGGCCTGTCAGCCCCACAGCTCCAGTGAGCACCACCAGCCGCCTAACACAATCCA
CTGTCCCTCAAACGTCAGGTGTCCACAGTGGCTGTGAAAGAAAACTGGTACGATTTGGTCCCAGAAGGTG
ACCGTCCATGGTCCATGCAGACACAGCACCCAGTATGAGGCGTGCTGGGACCTGAGGCCTGGACTTTCTG
ACTTTCTGGGGACTGCCACATCCAGGCTTTCTCCCCTGTGATTTTTGTTTTGTTTTGGTTTTTGTAGCGT
GCATTTGGGTCAAGTTTACACTAGCGAGATGATTATTTTTTAACAAAACAGGGTAGCAAGGAGCAGGAGA
TGCCGTGGCCGCACAGTCCGGCCCTGTGGGAACTGCTGGCCACAGCTCTTTTCCCAAGGCTGTCGTTCAG
TAGCACAGAGTGCCTCAAGGGGACCGCATCACTGTCACCAGGTCAGAAGAACTACTGAGACTTGCACATC
ACCTGTTCCACTGTGGACTTGGACTGACAGATGGACGACACATATGCTAGCTTGGACTTTAGTTTTCTGG
GACCCTAGAGATGGAACCCCAACCTTTCTCATGAGACAGAGCTCTACTGTGTGGGTCACTTGTTAGGTTG
AAAATGTAGAGCTCAGCTCTCGCCGCCCTGAAGTCCTGGCTCCATATGAAAGATCTCTGCAGCCATGACC
CTAACAGCACCTAGCTGTCCGCTGCAGGGCCTTGTGCTCTGTGCACACAATGCAGCAGTGCCCCGGCTCT
CACACGCACAGCACTCCCCGCCCTGCCCCACCTCTCTTAGAACCAGACCAGCACCATGGCTCTCCCACCC
CCACCCCCACCCCCAAGCACCTGGTCTGTCCCCATTGTTCTTGAGACTGCTAGCAGCATTCTGTCAAAGT
CACTACTGCTCCCTCCAGCCCCACCCTTAGCCATTGTTCAGAAAAATAGGCACCAAGCACCCCTCTGCTC
TCTGCCACCAGTGTGGTGTGACCACTCCAGCTCCCTGAGTATGAAAGCCACTGGCTACATGTGTGGGACC
ATCCTGCAGCCTTCCCGTTGTGCTCTGGGTGAGACAGTTGGGTCCAGCCAGCACATCACTGAAGGAGCTG
ATCTGCTGGAGGGACTTCAGGATGTGCGTCCCCTGCTGGCCTCTGCCATTGCCTCAGACCATGGCCTCCC
TGAAGGGGTGTCTACTGGAATGGCTACTATGCAGTTCTTACATAGTGGTGACTTACCACTGGCCACCCTG
ACCTCTCCTCTGTGCTTCTGGGGTTCCCTTTCATTGGGGTGAGGAAGCAAGGTCAAGGTCAGAGTGCCTC
TTGAAGGTTCTCCCAGATATGGGAACTGGGGCCTCTTCCCTGGAAATGAGGGCAGGGACCCAGTTCCATC
CTGGGGTGTGTCCCCAGATACAGCCTGGGTTAAAGGGCAGGGATTCATGGTGCTGACCCAGGCTCTCTGA
GAAGGCCCTGTCATTCCTGTTTGTGATGTTCTGAGGATGCCCATCTGTAGGTTTTTATTTTCAAATCAAG
CTCCGACCACCGCCATTTTGCCCAGTGCTTTCTATTTTGGTTTTATCCTAACATGTCACTGCCCTGAAAG
ACACCCCTACCTGGCCCCTTTCAATGGTCAGTGTCTGACCCACCACACTGGGTCCATCTGCTGTGCCACC
TGAGATAGTGCTGTGGTTATAATGTCTTTTACTATTGTATTAATGGCTAGCCTGTTACATTAGACTGGGG
GGGGGGGGTACAGAGGTCTGCTGTTTTGTGAGGCTTTTTGTTTTTTTGGGGGGTTGGTTTTGTTTTTTTT
AAAAGCTATTGGAATTCTAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4188854 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4188854 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_003902 same experiment
 EMAGE:31945 same embryo
 EMAGE:31866 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS