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EMAGE:29752

Vim vimentin ( MGI:98932)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:29752 EMAGE:29752 EMAGE:29752 EMAGE:29752 EMAGE:29752
euxassay_006174_01 euxassay_006174_02 euxassay_006174_03 euxassay_006174_04 euxassay_006174_05
EMAGE:29752 EMAGE:29752 EMAGE:29752 EMAGE:29752 EMAGE:29752
euxassay_006174_06 euxassay_006174_07 euxassay_006174_08 euxassay_006174_09 euxassay_006174_10
EMAGE:29752 EMAGE:29752 EMAGE:29752 EMAGE:29752 EMAGE:29752
euxassay_006174_11 euxassay_006174_12 euxassay_006174_13 euxassay_006174_14 euxassay_006174_15
EMAGE:29752 EMAGE:29752 EMAGE:29752 EMAGE:29752 EMAGE:29752
euxassay_006174_16 euxassay_006174_17 euxassay_006174_18 euxassay_006174_19 euxassay_006174_20
EMAGE:29752 EMAGE:29752
euxassay_006174_21 euxassay_006174_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8893
Entity Detected:Vim, vimentin ( MGI:98932)
Sequence:sense strand is shown

>T8893
GCCACTCTTGCTCCGGGACCCCAGAGACCCCAGCGCTCCTACGATTCACAGCCACCGCGCCCTCATTCCC
TTGTTGCAGTTTTTCCAGCCGCAGCAAGCCAGCCCACCTTCGAAGCCATGTCTACCAGGTCTGTGTCCTC
GTCCTCCTACCGCAGGATGTTCGGTGGCTCCGGCACATCGAGCCGGCCCAGCTCCAACCGGAGCTATGTG
ACCACGTCCACACGCACCTACAGTCTGGGCAGCGCACTGCGCCCCAGCACTAGCCGCAGCCTCTATTCCT
CATCCCCCGGTGGCGCCTATGTGACCCGGTCCTCGGCAGTGCGCCTGCGGAGCAGCGTGCCGGGCGTGCG
GCTGCTTCAAGACTCGGTGGACTTCTCGCTGGCCGACGCCATCAACACTGAGTTCAAGAACACCCGCACC
AACGAGAAGGTAGAACTGCAGGAGCTGAATGACCGCTTTGCCAACTACATCGACAAGGTGCGCTTCCTCG
AGCAGCAGAACAAAATCCTGCTGGCTGAGCTCGAGCAGCTCAAGGGCCAGGGCAAGTCGCGCCTGGGCGA
CCTGTACGAGGAGGAGATGCGGGAGCTGCGCCGGCAGGTGGATCAGCTCACCAACGACAAGGCCCGTGTC
GAGGTGGAGCGGGACAACCTGGCCGAGGACATCATGCGGCTGCGAGAGAAATTGCAGGAGGAGATGCTCC
AGAGAGAGGAAGCCGAAAGCACCCTGCAGTCATTCAGACAGGATGTTGACAATGCTTCTCTGGCACGTCT
TGACCTTGAACGGAAAGTGGAATCCTTGCAGGAAGAAATTGCCTTTTTGAAGAAACTGCACGATGAAGAG
ATCCAGGAGCTGCAGGCCCAGATTCAGGAACAGCATGTCCAGATCGATGTGGACGTTTCCAAGCCTGACC
TCACTGCTGCCCTGCGTGATGTGCGCCAGCAGTATGAAAGCGTGGCTGCCAAGAACCTCCAGGAGGCCGA
GGAATGGTACAAGTCCAAGTTTGCTGACCTCTCTGAGGCTGCCAACCGGAACAACGATGCCCTGCGCCAG
GCCAAGCAGGAGTCAAACGAGTACCGGAGACAGGTGCAGTCACTCACCTGTGAAGTGGATGCCCTTAAAG
GCACTAACGAGTCCCTGGAGCGCCAGATGCGTGAGATGGAAGAGAATTTTGCCCTTGAAGCTGCTAACTA
CCAGGACACTATTGGCCGCCTGCAGGATGAGATCCAAAACATGAAGGAAGAGATGGCTCGTCACCTTCGT
GAATACCAAGATCTGCTCAATGTTAAGATGGCCCTGGACATTGAGATCGCCACCTACAGGAAGCTGCTGG
AAGGCGAGGAGAGCAGGATTTCTCTGCCTCTGCCAACCTTTTCTTCCCTGAACCTGAGAGAAACTAACCT
GGAGTCACTTCCTCTGGTTGACACCCACTCAAAAAGAACACTCCTGATTAAGACGGTTGAGACCAGAGAT
GGACAGGTGATCAATGAGACTTCTCAGCATCACGATGACCTTGAATAAAAATTGCACACACTTGGTGCAA
CAGTGCAGTACCAGCAAGAAGGAAAAAAAAATCGTATCTTAGGAAAACAGCTTTCAAGTGCCTTTACTGC
AGTTTTTCAGGAGCGCAAGATAGATTTGGAATAGAAAGAAGCTCAGCACTTAACAACTGACACCCCAAAA
GACGTAGAAAAGGTTTACAAAATAATCTAGTTTACGAAGAAATCTTGTGCTAGAATACTTTTTAAAGTAT
TTTTGAATACCATTAAAACTGCTTTTTTCCAGTAAATATCTGACCAACTTGTTACTGCTTCAATAAATCT
TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6415629 using vector (pYX-Asc) specific primers. Forward Primer - name:RZ. T3, sequence:ATTAACCCTCACTAAAGGGA; Reverse Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG. Anti-sense probe was then transcribed from the PCR amplified template usi. T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6415629 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_006174 same experiment
 EMAGE:29747 same embryo
 EMAGE:29581 same embryo
 EMAGE:31540 same embryo
 EMAGE:29578 same embryo
 EMAGE:29746 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS