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EMAGE:30077

Sod3 superoxide dismutase 3, extracellular ( MGI:103181)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:30077 EMAGE:30077 EMAGE:30077 EMAGE:30077 EMAGE:30077
euxassay_004934_01 euxassay_004934_02 euxassay_004934_03 euxassay_004934_04 euxassay_004934_05
EMAGE:30077 EMAGE:30077 EMAGE:30077 EMAGE:30077 EMAGE:30077
euxassay_004934_06 euxassay_004934_07 euxassay_004934_08 euxassay_004934_09 euxassay_004934_10
EMAGE:30077 EMAGE:30077 EMAGE:30077 EMAGE:30077 EMAGE:30077
euxassay_004934_11 euxassay_004934_12 euxassay_004934_13 euxassay_004934_14 euxassay_004934_15
EMAGE:30077 EMAGE:30077 EMAGE:30077 EMAGE:30077 EMAGE:30077
euxassay_004934_16 euxassay_004934_17 euxassay_004934_18 euxassay_004934_19 euxassay_004934_20
EMAGE:30077 EMAGE:30077 EMAGE:30077 EMAGE:30077
euxassay_004934_21 euxassay_004934_22 euxassay_004934_23 euxassay_004934_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6942
Entity Detected:Sod3, superoxide dismutase 3, extracellular ( MGI:103181)
Sequence:sense strand is shown

>T6942
CCACGCGTCCGCTGGGTGCTGGCCTGAACTTCACCAGAGGGAAAGAGCTCTTGGGAGAGCCTGACAGGTG
CAGAGAACCTCAGCCATGTTGGCCTTCTTGTTCTACGGCTTGCTACTGGCGGCCTGTGGCTCTGTCACCA
TGTCAGATCCAGGGGAGTCCAGCTTCGACCTAGCAGACAGGCTTGACCCGGTTGAGAAGATAGACAGGCT
TGACCTGGTTGAGAAGATAGGCGACACGCATGCCAAAGTGCTGGAGATCTGGATGGAGCTAGGACGACGA
AGGGAGGTGGATGCTGCCGAGATGCATGCAATCTGCAGGGTACAACCATCAGCCACGCTGCCACCGGATC
AGCCACAGATCACCGGCTTGGTTCTCTTCCGGCAGCTGGGGCCGGGCTCCAGGCTTGAGGCCTATTTCAG
TCTGGAGGGCTTCCCAGCTGAGCAGAACGCCTCCAACCGTGCCATCCACGTGCATGAGTTCGGGGACCTG
AGCCAGGGCTGCGATTCCACCGGCCCGCACTACAACCCGATGGAGGTGCCGCACCCTCAGCACCCGGGCG
ACTTTGGCAACTTCGTGGTGCGCAACGGCCAGCTCTGGAGGCATCGCGTCGGCCTGACCGCGTCGCTGGC
CGGACCGCACTCCATCTTGGGCCGCTCTGTGGTGGTCCACGCCGGCGAGGACGACCTGGGTAAAGGTGGC
AACCAGGCCAGCCTGCAGAACGGCAATGCAGGTCGCCGGCTCGCCTGCTGCGTGGTAGGCACCAGCAGCT
CCGCCGCCTGGGAGAGCCAGACAAAGGAGCGCAAGAAGCGGCGGCGGGAGAGCGAGTGCAAGACCACTTA
AGCCTCACTCGGGGCCTCCGAGCCCAGCCGCTGCACGCATAGATGTCTCCAGGCGCCCCCAGACGCCTCT
AGTCACCCCAGAGGCCTCTAGGCGTCCTAGACAGAGGCCTCCCAGACACCTCAGTCGCCTCTGCGCTTCC
ATGCACGCCAGACACCTCTCTATGGCCCCCAGATGCCTCCACGAAACTCCGCGCACCCCAGATGTTCTCC
CATGTCCCGGACACCGTTCCTCTGTGTCCAGGACACCTTAGTTAATTCAGAAATCTTTTCATGCCCTATG
CACTTCCACAGACCCAGATCCTTAATGCTCTAGATCCATCCCGAGCCCCTTTGTGTCCCAAGACAATCCC
ACAAGCCCCTAGTCTTTGAGTCTGCTCTCAGAGAACCCCCTCTTCCTCCCCAGAGATCGCATGTGCTCAG
ATACTCTCCTCCTCTGAGGACTTCCCAGTGAGCACCTTTGAGAGTACTCCCTTGGGGTATACTGAAATAT
CGCCCACCCCATTTCCTCCTGCCCCCTTTTGTTTTCTTCCTGTCCCCATAGCACCCGAGACTCCTCTCTT
CCCTAGAGACCTCTTTTTTCTTCCCTTTGTTCCTCCAAGGCGCTCTGGGACCACTCTGACACCCTCACCC
CCACCCCCAAGTTCCATGTTCCCGATCACCTCCTGCAGAGGCCCCAGGTTCTGTTTTCATCTGTTTCCCA
TATGGTGCCTGCACCCCAGGGAGAGCAGCTCCTTAGAGAGAGTATTTGGGAACCTTTATGTTGCTCATTA
AAAACATAGCAATTCACAACACAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3983917 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3983917 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_004934 same experiment
 EMAGE:30976 same embryo
 EMAGE:30184 same embryo
 EMAGE:30685 same embryo
 EMAGE:30079 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS