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EMAGE:30400

Gdf9 ( MGI:95692)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:30400
euxassay_001937_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T3978
Entity Detected:Gdf9, ( MGI:95692)
Sequence:sense strand is shown

>T3978
AAGAGGTAATCCGCACGAGGAGATGCGTTCCTTCTTAGTTCTCCCAAGTCATGGCACTTCCCAGCAACTT
CCTGTTGGGGGTTTGCTGCTTTGCCTGGTTGTGTTTTCTTAGTAGCCTTAGCTCTCAGGCTTCTACTGAA
GAATCCCAGAGTGGAGCCAGTGAAAATGTGGAGTCTGAGGCAGACCCCTGGTCCTTGCTGCTGCCTGTAG
ATGGGACTGACAGGTCTGGCCTCTTGCCCCCCCTCTTTAAGGTTCTATCTGATAGGCGAGGTGAGACCCC
TAAGCTGCAGCCTGACTCCAGAGCACTCTACTACATGAAAAAGCTCTATAAGACGTATGCTACCAAAGAG
GGGGTTCCCAAACCCAGCAGAAGTCACCTCTACAATACCGTCCGGCTCTTCAGTCCCTGTGCCCAGCAAG
AGCAGGCATCCAGCAACCAGGTGACAGGACCGCTGCCGATGGTGGACCTGCTGTTTAACCTGGACCGGGT
GACTGCCATGGAACACTTGCTCAAATCGGTCTTGCTATACACTCTGAACAACTCTGCCTCTTCCTCCTCC
ACTGTGACCTGTATGTGTGACCTTGTGGTAAAGGAGGCCATGTCTTCTGGCAGGGCACCCCCAAGAGCAC
CGTACTCATTCACCCTGAAGAAACACAGATGGATTGAGATTGATGTGACCTCCCTCCTTCAGCCCCTAGT
GACCTCCAGCGAGAGGAGCATTCACCTGTCTGTCAATTTTACATGCACAAAAGACCAGGTGCCAGAGGAC
GGAGTGTTTAGCATGCCTCTCTCAGTGCCTCCTTCCCTCATCTTGTATCTCAACGACACAAGCACCCAGG
CCTACCACTCTTGGCAGTCTCTTCAGTCCACCTGGAGGCCTTTACAGCATCCCGGCCAGGCCGGTGTGGC
TGCCCGTCCCGTGAAAGAGGAAGCTATTGAGGTGGAAAGATCTCCCCGGCGCCGTCGAGGGCAGAAAGCC
ATCCGCTCCGAAGCGAAGGGGCCACTTCTTACAGCATCCTTCAACCTCAGCGAATACTTCAAACAGTTTC
TTTTCCCCCAAAACGAGTGTGAACTCCATGACTTCAGACTGAGTTTTAGTCAGCTCAAATGGGACAACTG
GATCGTGGCCCCGCACAGGTACAACCCTAGGTACTGTAAAGGGGACTGTCCTAGGGCGGTCAGGCATCGG
TACGGCTCTCCTGTGCACACCATGGTCCAGAATATAATCTATGAGAAGCTGGACCCTTCAGTGCCAAGGC
CTTCGTGTGTGCCGGGCAAGTACAGCCCCCTGAGTGTGTTGACCATTGAACCCGACGGCTCCATCGCTTA
CAAAGAGTACGAAGACATGATAGCTACGAGGTGCACCTGTCGTTAGCATGGGGGCCACTTCAACAAGCCT
GCTTGGCAGAGCAATGCTGTGGGCCTTAGAGTGCCTGGGCAGAGAGCTTCCTGTGACCAGTCTCTCCGTG
CTGCTCAGTGCACACTGTGTGAGCGGGGGAAGTGTGTGTGTGGATGAGCACATCGAGTGCAGTGTCCGTA
GGTGTAAAGGGCACACTCACTGGTCGTTGCCATAAACCAAGTGAAATGTAACTCATTTGGAGAGCTCTTT
CTCCCCACGAGTGTAGTTTTCAGTGGACAGATTTGTTAGCATAAGTCTCGAGTAGAATGTAGCTGTGAAC
ATGTCAGAGTGCTGTGGTTTTATGTGACGGAAGAATAAACTGTTGATGGCATAAATAAAAAAAAAAAAAA
AA
Notes:The probe template was PCR amplified from IMAGE:30054181 using vector (pSPORT1) specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template usi. T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:30054181 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_001937 same experiment
 EMAGE:29507 same embryo
 EMAGE:30421 same embryo
 EMAGE:30396 same embryo
 EMAGE:30423 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS