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EMAGE:30942

Rerg ( MGI:2665139)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:30942 EMAGE:30942 EMAGE:30942 EMAGE:30942 EMAGE:30942
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EMAGE:30942 EMAGE:30942 EMAGE:30942 EMAGE:30942 EMAGE:30942
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EMAGE:30942 EMAGE:30942 EMAGE:30942 EMAGE:30942 EMAGE:30942
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EMAGE:30942 EMAGE:30942 EMAGE:30942 EMAGE:30942 EMAGE:30942
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euxassay_004037_21 euxassay_004037_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
meckel's cartilage
moderate moderate
regionalmoderate expression: see section 04 05 06 07 08 09 10 15 16 17 18
nasal cavity olfactory epithelium
moderate moderate
regionalmoderate expression: see section 07 08 09 10 11 12 13 14 15 16 17 18
limb
moderate moderate
regionalmoderate expression: see section 01 02 03 04 05 06 07 08 17 18
bladder
weak weak
regionalweak expression: see section 11 12 13
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4156
Entity Detected:Rerg, ( MGI:2665139)
Sequence:sense strand is shown

>T4156
CCCACGCGTCCGCTGGGCCCCTGCCTGCTCCTGTTGCCTAGCCTCGCTTTCAGTGAGTCACCAGATACCC
TGGATTGTGAACTCTTCTGACTGGCGATGACACAGTGAAACTAAAGGCCACCATCAAAACCATCTGCTCA
CATCTGGAATCTGAACATTAAACTCTGTCACTACCAGCCATGGCTAAGAGCGCAGAGGTCAAGCTGGCCA
TATTTGGAAGAGCAGGCGTGGGCAAGTCAGCGATTGTAGTGAGATTTCTGACCAAACGGTTCATCTGGGA
GTATGATCCAACCCTCGAATCAACCTACCGACACCAGGCAACCATAGACGATGAAGTTGTTTCTATGGAG
ATCCTGGACACCGCTGGCCAGGAAGACACCATCCAGAGGGAAGGGCACATGCGCTGGGGAGAAGGCTTCG
TGTTGGTTTACGACATCACCGATCGAGGGAGCTTCGAAGAAGTGCTGCCGCTGAAGAACATCTTAGATGA
AGTCAAAAAGCCCAAAAACGTGACTCTCATCTTGGTCGGAAACAAAGCCGACTTGGACCACTCCAGACAA
GTGAGCACAGAAGAAGGGGAGAAGCTGGCGACGGAACTGGCGTGTGCGTTTTACGAATGTTCCGCCTGCA
CCGGAGAAGGGAACATCACGGAGGTGTTCTATGAGCTCTGTCGAGAGGTGCGTCGCAGGAGGATGGTGCA
GGGCAAGACAAGGCGCCGCAGCTCCACCACACACGTCAAGCAAGCGATTAACAAGATGCTCACCAAAATC
AGTAGTTAGAGGTCTTGCCGAAATGTGCTGGAACGTGGGAAGGCCTTCCTGGCTCTCCTGCTGCCCCTCT
AGCCACAGCCAAGATGTCCTTCTCCTTATTCTGAGTTTGGGGGATGTCAGGGTTTCTCGTGGGTCCCTCT
CCACTATATGCTGGGAAATTCTCTGAGTATCTTCTGCAGCCCCATGCTGTGACAGTCTCTCCCTTCCCTG
CTTGCCGTAGGATCCGTGCAAATGTAGTTTGAAGATGCAACCACCAAAGATGCTGAAGTGGCTGGGTCCG
TGGAGGCTAATTGTAGGCATCTCTGCCTTGATTTAACAAGTTGAAGTCTTTTCAAAGGCATTTTAAGATT
CTGAATCTTGTGGAAGACTACAAAGGTCACCATAAGGTTTTGTGATGTCTGGTGTGAACTTGAGGAGGGT
AGCTGAGCGATTAGAACCGGGGAACAGAATTCTAGTTCCCATTTGAAGCGAGGATTTTTTTTTAATTGTT
ATTATTATTACCTTACTTAAATTATGCCATTTTTCTTTAACATTTTATTTTATTTTTAGATTGAAATGTT
ATTACTGACTTTGTGATGTAATTGCCCATTTCAATTAAAATTGATTCTCTCAATAATCTACAGCGGTCCT
CACATACCCTATTCTATTATTTCCTTAATAACAAAAGAAACAAGACCCGCAATTCACACCCTGCTGTGGC
TTTGCTTCCCCAAGCCTTGGTGATAAGAAAAACAAACCCACTAGGAATCTTTGTGCCCACTCCTGGCCTC
ACTGCATGTTAGTAGGGGATTGCAATTAGAGACACCTGGTTTGTATATTGCTCTATTAGCACCGTAGCGG
GAAGCTAACCCTCTAAATGAGAAAATTATGGCGCTTAGTTATTTCTTTTTGGAAGCAAAGGCAGAATCCT
ATGCATTCAGAAAGAGCCAGCCGCTGATTCAGTAAGTTGGCCACATGCCTTGTTAACCTTCTAACCTTTG
GGTAAGATTAATTCACATGGGAGAATTCAGAAAAATAATGGGTGAGTAAAATTCACTCTACGTGAACGAG
CGTGCACAAAGTAGATGCTTGGCTGGCAAAAGGATTATGTAACTGCCAAGAGTTTATGATCCTTCTCTTC
ATTTCCTGCCCCATATACTGAGATTTGGCCACTTTATTTTAGAATAAAATATATATCTTTTACGATGTAT
TTATATGTATACATATAAGTATGTATAAAATTTGTAAGCAGCGAAGATTTTAATTCACCAATGTATTTGA
ACAATCTGGTGTAACTGACTTCGTTTTATGTGATTATAATAAAAAATATAATTTTCAAATTCAAAAAAAA
AAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4483442 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4483442 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_004037 same experiment
 EMAGE:30888 same embryo
 EMAGE:30014 same embryo
 EMAGE:30023 same embryo
 EMAGE:30022 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS