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EMAGE:31343

Slc13a2 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 ( MGI:1276558)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
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euxassay_019734_16 euxassay_019734_17 euxassay_019734_18 euxassay_019734_19 euxassay_019734_20
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euxassay_019734_21 euxassay_019734_22 euxassay_019734_23 euxassay_019734_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
neural retina
weak weak
regionalweak expression: see section 01 02 03 04 05
ventral grey horn
strong strong
regionalstrong expression: see section 13 14 15 16 18 moderate expression: see section 17
olfactory cortex mantle layer
moderate moderate
regionalmoderate expression: see section 11 12 13 14 16 17 18 19
vestibulocochlear viii ganglion
moderate moderate
regionalmoderate expression: see section 09 20 21 weak expression: see section 08 10
glossopharyngeal ix ganglion
moderate moderate
regionalmoderate expression: see section 09 10 21
trigeminal v nerve
moderate moderate
regionalmoderate expression: see section 19 weak expression: see section 11
pons mantle layer
strong strong
regionalstrong expression: see section 09 19
dorsal root ganglion
moderate moderate
regionalmoderate expression: see section 10 11 12 13 17 18 19 20 21
medulla oblongata basal plate mantle layer
strong strong
regionalstrong expression: see section 10 11 12 18 19
facial vii ganglion
moderate moderate
regionalmoderate expression: see section 06 07 22 23
vagus x ganglion
moderate moderate
regionalmoderate expression: see section 20
cerebral cortex mantle layer
moderate moderate
regionalmoderate expression: see section 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24
trigeminal v ganglion
moderate moderate
regionalmoderate expression: see section 05 06 07 08 09 10 19 20 21 22 23 24 weak expression: see section 11
telencephalon mantle layer
moderate moderate
regionalmoderate expression: see section 02 03 04 05
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T56057
Entity Detected:Slc13a2, solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 ( MGI:1276558)
Sequence:sense strand is shown

>T56057
AGGGCAAAGCATGGTATCAGATGGGACAGTGGCCATCTTTATCAGCCTGATTATGTTCATCATACCCTCC
AAGATTCCAGGACTAACCGAGGACCCAAAAAAACCAGGGAAGCTGAAGGCTCCTCCTGCCATCCTCACCT
GGAAGACAGTGAACGATAAGATGCCCTGGAATATCCTGATCTTGCTGGGTGGGGGCTTTGCCCTGGCCAA
AGGCAGTGAGGAATCAGGTTTGTCTAAGTGGCTGGGAGACAAACTGACCCCGCTGCAGCACGTACCGCCA
TCAGCCACCGTGCTCATCCTCTCTCTATTGGTGGCCATCTTCACTGAGTGCACCAGCAACGTGGCCACCA
CTACACTATTTCTGCCCATCCTGGCCTCCATGGCACAGGCCATCTGCCTTCACCCGCTTTATGTCATGCT
TCCCTGCACCCTGGCTGCCTCCCTAGCTTTCATGCTACCCGTGGCCACTCCACCCAACGCCATTGTCTTC
TCTTTTGGAGGCCTCAAAGTGTCTGATATGGCCCGTGCAGGATTCCTGCTCAATATCATCGGAGTGCTGA
CTATCACATTATCCATAAACAGCTGGAGTATCCCTATCTTCAAGCTGGACACATTTCCCACCTGGGCCTA
CTCCAACACAAGCCAGTGCCTTCTCAATCCGCCTAATTCCACTGTACCAGGCCACTAGACTATGGTACAA
CCTAGCTCTGCTAGGGGAAAAGCCGCTGGTGCCACTCCTCGGAGCCAGGAGAGGGCGCTCCAAACTCCAA
GTCCCGGGACAGAGGTGCAGAATCGGCTGGCGCATGCGAAATCATGTATTCGTGTGTTTGCCTACATCCT
GTATGTGTGCTCTCCGGTGAAGAGGAAGATGCTCGTGTCTCCGTGTGGTGTGCGTGGACGCTTGCGTGTG
GTGTGGCCTGAGGGCTCCTCAGTAGTTGTATGCATGGCAACCGCGCCCGCCCTCTGACTCCCAGCTAGGC
CTCCAGATCTCTTTGCCCTG
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. .
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_019734 same experiment
 EMAGE:31341 same embryo
 EMAGE:13495 same embryo
 EMAGE:13496 same embryo
 EMAGE:13497 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS