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EMAGE:31877

Fam114a2 family with sequence similarity 114, member A2 ( MGI:1917629)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31877 EMAGE:31877 EMAGE:31877 EMAGE:31877 EMAGE:31877
euxassay_001722_01 euxassay_001722_02 euxassay_001722_03 euxassay_001722_04 euxassay_001722_05
EMAGE:31877 EMAGE:31877 EMAGE:31877 EMAGE:31877 EMAGE:31877
euxassay_001722_06 euxassay_001722_07 euxassay_001722_08 euxassay_001722_09 euxassay_001722_10
EMAGE:31877 EMAGE:31877 EMAGE:31877 EMAGE:31877 EMAGE:31877
euxassay_001722_11 euxassay_001722_12 euxassay_001722_13 euxassay_001722_14 euxassay_001722_15
EMAGE:31877 EMAGE:31877 EMAGE:31877 EMAGE:31877 EMAGE:31877
euxassay_001722_16 euxassay_001722_17 euxassay_001722_18 euxassay_001722_19 euxassay_001722_20
EMAGE:31877 EMAGE:31877 EMAGE:31877 EMAGE:31877
euxassay_001722_21 euxassay_001722_22 euxassay_001722_23 euxassay_001722_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
telencephalon marginal layer
moderate moderate
regionalmoderate expression: see section 03 04 05 06 07 08 09 10 11 12 13 15 16 17 18 19 20
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4087
Entity Detected:Fam114a2, family with sequence similarity 114, member A2 ( MGI:1917629)
Sequence:sense strand is shown

>T4087
GTCGGATCGGCGAGCGAGCGGCGGTGGCCGCGGTGATGTTGTAGTCATGTCAGATAAGGATCCTCCAGAG
TCTCCAGTGGTAACCGAAGTAGCTTCGACCCTTAAAGATGAGAACTGTGAGCCAGTGGAGAAGCCAGAGG
ATAAATCTCAGCCTGTAGTGTCCACCCGGAAAAGACCAGAGACCAAACCTTCCAGTGACCTTGAGGCTTC
TGCTCTTCCTGCTCAGGTTTCACTGGCTGTAGCCAAAGAGACTGCTTCTAAAGATGTACCTCAGACTGGG
TGGGGTTATTGGGGCAGTTGGGGCAAGTCTCTGCTCTCCTCAGCCTCAGCTACGGTAGCTACAGTAGGAC
AAGGTATTTCAAATGTCATTGAGAAGGCAGAGACTTCTCTTGGGATTCCTAGCCCCACTGAAATTTCAGC
TGAAGTCAAGCAAGCAGCAGGAGAAAAAAATGCTGGTGAGAATGGAAGCTTACTAGTGGCTGCACCATTC
GGGATGCTCTCGACCATCTCTACAGCTGTGCAGAGCACGGGCAAGAGCGTTATCAGCGGGGGCTTGGATG
CCTTGGAATTCATTGGGAAGAAGACAATGGATGTCATAGCAGAAGGGGACCCTGGATTTAAAAGAACCAA
GGGCCTGATGAATCGGACTTCTACGCTGTCTCAGGTTTTACGAGAGGCAAAGGATAAAGAAGAGCAGCGG
CCTTCCAATGAAGTAACCATGGAAACAGACAAGAAAACTCATTATGGGCTACTCTTTGATGAGTTTCAAG
GCCTTTCACATCTAGAAGCTCTGGAGATGCTTTCCCGAGAAAGTGAGATAAAGGTGAAATCTATTCTTAG
TTCTCTGAGTGGAGAAGAACTACAGACAACTAGACTTGAGCTAGAGCAGCTCAAAGAAGTGTTTTCCCTA
GCAGAGTTCTGTGAGGAAGAGGAGGAGGAGAGACAAGGGGATGACGATTTTACCAAGGAGATAACAGATC
TGTTTGCTCAGCTTCACATCTCCTCCCGACCAGAGAAGCTTGCCAGGGCAAGAAATACAGCCTACAAATG
GATCAGAACATCTCTGGCTAGGCCAGTAGCAGAGAAAGAAGAAGGAGAAAAAGAGTCGGAGGCAGGAAAT
ACCGAGGAAGCCCAGAAACATTCAATAGAGGATATCCATGCATTTGCAATCCGGAGCTTAGCAGAGTTGA
CTGCCTGCTCAATAGAATTGTTCCACAAAACAGCAGCATTGGTTCTGCATGGCCAGAAGCAGGAGGTGAC
AGCCTTAGAGAGGAGCCAGACTCTCTCCCAGATGACAGTCATGCTGTGTAAAGACCTGGCCTCGCTGTCT
AAAGAGTTCACCACCTGCCTGACCACAGTTGGGGTCAGAGAGAAGGCAGATGTTCTTAATCCAGTCATCA
CTGCAGTGTTTCTAGAGGCCTCAAACAGCGCCTCTTACATTCAAGATGCCTTCCAACTCCTCCTGCCTGT
GCTGCAGATCTCTCTCATCGAGAGCAAGACAGAGTCATCCACGTGTGAGCCACAGCCCAGAGACCTCTGA
CAGAACCCTGAGGAGCAGAGAAGAGTCCTCCTGAGATGGTGATAGCCAAGAAATCTGACTTTGCTCAGGG
AGCCCTGCAGCCAGAGCGAGGCATAGTACTACGTGTGTGAAAGGCCAGCATGGCGCAGGCTCACAGGGGT
GCTTGCTTCTCTGCGTAGCTGATGCGCTCTGCTGCTCACACTGCTCTTCCAGCCTTATAAGTAATAAATT
ATTAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4456429 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4456429 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_001722 same experiment
 EMAGE:29989 same embryo
 EMAGE:31273 same embryo
 EMAGE:31795 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS