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EMAGE:31908

Slc25a13 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 ( MGI:1354721)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31908 EMAGE:31908 EMAGE:31908 EMAGE:31908 EMAGE:31908
euxassay_006704_01 euxassay_006704_02 euxassay_006704_03 euxassay_006704_04 euxassay_006704_05
EMAGE:31908 EMAGE:31908 EMAGE:31908 EMAGE:31908 EMAGE:31908
euxassay_006704_06 euxassay_006704_07 euxassay_006704_08 euxassay_006704_09 euxassay_006704_10
EMAGE:31908 EMAGE:31908 EMAGE:31908 EMAGE:31908 EMAGE:31908
euxassay_006704_11 euxassay_006704_12 euxassay_006704_13 euxassay_006704_14 euxassay_006704_15
EMAGE:31908 EMAGE:31908 EMAGE:31908 EMAGE:31908 EMAGE:31908
euxassay_006704_16 euxassay_006704_17 euxassay_006704_18 euxassay_006704_19 euxassay_006704_20
EMAGE:31908 EMAGE:31908 EMAGE:31908
euxassay_006704_21 euxassay_006704_22 euxassay_006704_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
heart ventricle
moderate moderate
regionalmoderate expression: see section 08 09 10 11 12 13 14 15 16 17 18
right lung
moderate moderate
regionalmoderate expression: see section 16 17 18 19 20 21 22 23
stomach
weak weak
regionalweak expression: see section 02 03 04 05 06 07 08 09 10 11
rectum
moderate moderate
regionalmoderate expression: see section 15
left lung
moderate moderate
regionalmoderate expression: see section 05 06 07 08 09 10 11 12 13 14 15
midgut
moderate moderate
regionalmoderate expression: see section 12 13 14 15 16 17 18 19 20 weak expression: see section 08 09 10 11
thyroid gland
moderate moderate
regionalmoderate expression: see section 13 17
choroid invagination
moderate moderate
regionalmoderate expression: see section 18 19 20 weak expression: see section 08 09 10 11 12
pancreas
moderate moderate
regionalmoderate expression: see section 10 11 12 16 17
submandibular gland primordium
moderate moderate
regionalmoderate expression: see section 08 09 10 11 12 18 19 20
metencephalon part of 4th ventricle choroid plexus
weak weak
regionalweak expression: see section 13 14 15 16 17 18 19 20 21 22 23
thymus primordium
moderate moderate
regionalmoderate expression: see section 13 14 15 16 17
renal cortex
moderate moderate
regionalmoderate expression: see section 08 09 10 11 12 13 18 19 20 21
adrenal gland
moderate moderate
regionalmoderate expression: see section 09 10 11 12 18 19 20
vibrissa
moderate moderate
regionalmoderate expression: see section 05 06 07 08 09 20 21 weak expression: see section 22 23
telencephalon ventricular layer
moderate moderate
regionalmoderate expression: see section 13 16 17 18 19 20 weak expression: see section 03 04 05 06 07 08 09 10 11 12 14 15 21 22 23
midbrain ventricular layer
weak weak
regionalweak expression: see section 11 12 13 14 15 16 17 18
nasal cavity olfactory epithelium
weak weak
regionalweak expression: see section 10 11 12 13 16 17 18 19
liver
moderate moderate
regionalmoderate expression: see section 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23
lower jaw incisor
moderate moderate
regionalmoderate expression: see section 12 13 16 17
upper jaw incisor
moderate moderate
regionalmoderate expression: see section 12 13 16 17
orbito-sphenoid
moderate moderate
regionalmoderate expression: see section 03 04 05 06 07 21 22 23
diencephalon lateral wall ventricular layer
weak weak
regionalweak expression: see section 13 14 15
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6664
Entity Detected:Slc25a13, solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 ( MGI:1354721)
Sequence:sense strand is shown

>T6664
GGAAGATCTACAGTACTCTGGCTGGCAACAGGAAAGACGTGGAGGTGACTAAGGAGGAGTTCGCTTTGGC
AGCCCAGAAGTTTGGTCAGGTTACACCCATGGAAGTTGACATCTTGTTTCAGTTAGCAGATTTATATGAG
CCGAGGGGGCGCATGACCTTAGCAGACATTGAGCGGATCGCCCCTCTAGAGGAAGGAATGTTACCCTTCA
ACTTGGCCGAGGCCCAGAGGCAGAAGGCCTCGGGTGATGCTGCTCGGCCCTTTCTTCTGCAGCTCGCAGA
GTCAGCCTACAGGTTTGGACTGGGTTCTATTGCTGGAGCTGTCGGAGCCACTGCCGTGTATCCTATCGAT
CTTGTAAAGACTCGAATGCAGAACCAGAGATCAACCGGCTCTTTTGTGGGCGAGCTCATGTATAAAAACA
GCTTTGACTGCTTTAAGAAGGTGCTCCGCTACGAAGGCTTCTTTGGACTGTACCGAGGTTTGCTGCCACA
GTTACTGGGAGTCGCCCCGGAGAAGGCCATAAAACTTACAGTGAACGATTTTGTGAGAGATAAATTTATG
CACAAAGATGGCTCCGTCCCACTTTTGGCAGAGATTTTTGCTGGAGGCTGTGCTGGAGGCTCCCAAGTGA
TTTTCACAAATCCTTTAGAGATTGTGAAAATCCGCTTACAAGTGGCCGGAGAGATCACCACTGGCCCCCG
AGTCAGCGCCCTGTCGGTGGTACGAGACCTGGGGTTCTTTGGCATCTACAAGGGCGCCAAAGCATGCTTC
CTGAGGGACATTCCTTTCTCAGCCATCTACTTCCCGTGCTATGCCCACGTGAAGGCTTCCTTTGCAAATG
AAGACGGGCAGGTCAGCCCCGGAAGCCTGCTCTTAGCCGGTGCTATTGCTGGTATGCCTGCGGCATCTTT
AGTGACCCCTGCTGATGTTATCAAGACTAGATTACAGGTGGCTGCCCGGGCTGGCCAAACCACTTACAAC
GGTGTGACCGACTGCTTCAGAAAGATACTTCGAGAAGAGGGCCCCAAAGCATTGTGGAAAGGAGTTGCTG
CTCGTGTCTTCCGCTCCTCGCCCCAGTTTGGTGTCACCTTGCTTACGTATGAATTGCTGCAGCGGTGGTT
CTATGTCGATTTTGGAGGCGTGAAGCCCGTGGGATCTGAGCCGGTTCCTAAATCCCGGATTACTCTGCCC
GCTCCCAATCCTGACCACGTAGGGGGCTACAAACTGGCCGTTGCCACATTCGCAGGGATTGAGAACAAAT
TTGGACTTTACCTACCTCTCTTTAAGCCATCAGCATCTACCTCAAAAGTGACTGCTGGGGACTCCTAGAG
TGACTGACCTGGATGTGCCTGTAAAATGATTGGAACCACAATAAGCCTCATCTGGGTCTGAGGCCTGGCT
CCGTCCCTTCCACATCTGTCCCATTTAAATTCAGGTCAATGCTTCCTATATTAAATGCAATCATTCATTT
TTCTGGATGTTTTTGTAGCAAGATCATGGGGAATTATTCCTAATTATCCTTTGGCACTTTGCCCACAACC
TGTGTTTGTATCTTTTAAATACTGGGATTTGGTCAATACTAACTTGATGTGGAGTAAGTCTGAAGGGAAA
TTAAGGAGGTCTCCTACCTGGATGATGGTCTCACTAATGCTACTGAAAGGCGGCCATGGTTTCCAAAAGA
CTTCTGAGTATGTTTAAAGTAGTAGAAAGCAAAGTATATATTTATAAAAATGAAAAAAAAAAAAAAAAAA
AAAAA
Notes:The probe template was PCR amplified from IMAGE:3600909 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3600909 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_006704 same experiment
 EMAGE:31905 same embryo
 EMAGE:31355 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS