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EMAGE:6965

Idua iduronidase, alpha-L- ( MGI:96418)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:6965 EMAGE:6965 EMAGE:6965 EMAGE:6965 EMAGE:6965
"Pseudo-wholemount" of euxassay_002493. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_002493_01 euxassay_002493_02 euxassay_002493_03 euxassay_002493_04
EMAGE:6965 EMAGE:6965 EMAGE:6965 EMAGE:6965 EMAGE:6965
euxassay_002493_05 euxassay_002493_06 euxassay_002493_07 euxassay_002493_08 euxassay_002493_09
EMAGE:6965 EMAGE:6965 EMAGE:6965 EMAGE:6965 EMAGE:6965
euxassay_002493_10 euxassay_002493_11 euxassay_002493_12 euxassay_002493_13 euxassay_002493_14
EMAGE:6965 EMAGE:6965 EMAGE:6965 EMAGE:6965 EMAGE:6965
euxassay_002493_15 euxassay_002493_16 euxassay_002493_17 euxassay_002493_18 euxassay_002493_19
EMAGE:6965 EMAGE:6965 EMAGE:6965 EMAGE:6965 EMAGE:6965
euxassay_002493_20 euxassay_002493_21 euxassay_002493_22 euxassay_002493_23 euxassay_002493_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:6965Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
6965_wholemount_strong.wlz
6965_wholemount_moderate.wlz
6965_wholemount_weak.wlz
6965_wholemount_possible.wlz
6965_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:6965_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5113
Entity Detected:Idua, iduronidase, alpha-L- ( MGI:96418)
Sequence:sense strand is shown

>T5113
GCCGCCTAAAAAGCTTGCTGTTTAGGGGCACCTGGATATCCCAACCATGCGACCCCCGCGTCCCTCCTCA
GCTATGCTGACGTTTTTTGCTGCGTTCTTGGCCGCGCCCTTGGCGCTGGCTGAGTCACCGTACCTGGTGC
GTGTGGACGCAGCCCGCCCGCTGAGGCCTCTGTTGCCCTTCTGGAGGAGCACCGGCTTCTGCCCCCCACT
GCCTCACGACCAGGCTGACCAGTACGACCTTAGTTGGGACCAGCAACTGAACCTTGCCTACATAGGTGCC
GTACCTCACAGTGGCATTGAGCAGGTCCGGATACACTGGCTGCTGGATCTCATCACAGCCAGGAAGTCAC
CTGGGCAGGGACTTATGTACAACTTCACCCACTTGGATGCATTCTTGGACCTTCTCATGGAGAACCAGCT
TCTCCCTGGATTTGAGCTCATGGGCAGTCCTTCTGGGTACTTCACGGACTTTGATGACAAGCAGCAGGTG
TTTGAATGGAAGGACCTGGTTTCTCTCTTGGCCAGGAGATACATTGGTAGGTATGGGCTGACACACGTTT
CCAAGTGGAACTTTGAGACTTGGAATGAACCAGACCACCATGACTTTGACAACGTGTCCATGACCACACA
AGGCTTCCTGAATTACTATGATGCCTGCTCTGAGGGGCTGCGCATTGCCAGCCCCACTTTGAAGTTGGGT
GGTCCTGGGGATTCCTTCCACCCCCTGCCAAGGTCACCAATGTGCTGGAGCCTCCTGGGTCACTGTGCCA
ATGGAACCAACTTCTTCACTGGCGAGGTGGGCGTGCGTCTGGATTACATCTCCCTGCACAAGAAGGGTGC
AGGTAGCTCCATCGCCATCCTGGAGCAGGAGATGGCAGTTGTGGAGCAGGTCCAGCAGCTCTTCCCTGAG
TTCAAGGATACCCCCATTTACAATGACGAGGCAGACCCTCTGGTGGGCTGGTCCCTGCCACAACCTTGGA
GAGCTGATGTGACTTATGCGGCCCTGGTGGTGAAGGTCATTGCACAGCACCAGAACCTGCTGTTTGCCAA
CAGCAGTTCCTCCATGCGCTATGTGCTCCTCAGCAATGACAATGCCTTCCTGAGCTACCACCCGTACCCT
TTCTCCCAGCGCACACTTACTGCTCGATTCCAGGTCAACAATACTCACCCACCCCATGTGCAGTTGCTGC
GAAAGCCAGTACTCACAGTCATGGGGCTCATGGCCCTGTTGGATGGAGAACAACTCTGGGCAGAGGTCTC
AAAGGCTGGGGCTGTGTTGGACAGCAATCATACAGTGGGTGTCCTGGCCAGCACCCATCACCCTGAAGGC
TCCGCAGCGGCCTGGAGTACCACAGTCCTCATCTACACTAGTGATGACACCCACGCACACCCCAACCACA
GTATCCCTGTGACTCTTCGCCTGCGTGGGGTACCTCCTGGCTTGGATCTTGTCTACATAGTACTCTACTT
AGACAATCAACTCAGCAGCCCCTACAGTGCGTGGCAGCACATGGGCCAGCCAGTCTTCCCCTCTGCAGAG
CAGTTCCGACATATGCGCATGGTGGAGGACCCCGTGGCTGAGGCACCACGCCCCTTTCCTGCTAGGGGCC
GCCTGACCCTACACCGGAAGCTTCCGGTGCCATCACTCCTGCTGGTGCATGTATGCGCACGCCCCTTGAA
GCCACCTGGGCAGGTCAGCCGGCTCCGTGCACTGCCCCTGACACATGGACAGCTGATTTTGGTCTGGTCA
GATGAGCGTGTGGGCTCCAAGTGCCTGTGGACATATGAGATCCAGTTTTCCCAGAAAGGTGAAGAGTATG
CCCCAATCAACAGGAGGCCGTCTACTTTTAACCTCTTTGTGTTCAGCCCAGACACAGCTGTGGTCTCTGG
CTCCTACCGAGTTCGAGCATTGGATTACTGGGCCCGGCCAGGCCCCTTCTCCGACCCTGTGACTTACCTG
GATGTCCCTGCCTCATGAGAGCCACTGGCTCCTAGTGACTTGTGAATCTGTGCTGACTGGTGAATGGAGT
CAACCAGTATGAGCTAGACTGCCATTAGCTAGGCAGCTGACTATCAGCTTCTATTGTTCTTCCCCTATTT
CCCTTTAAAGTGTCTTTCTCTACCTCAGACTTAGGGTCAGTCTTTGTGGCTAAGCACTTTATAGGCCCAG
TTGGAGTGACCTTTGCCCACCTTCCTCCCCATGCCCAGCTGTTCAAAAAGTTTAAATGTGGGACTGGAAA
GATGGCTCAGTAGATAAAGTGCTTGCTGTGCAGGCCCAGGGACTTGTGTTCAGATATCTAGCACTCATGT
ATAGGCTGGGCATGGCAATATATGCCTATTGTCCTAGTGTTGGTGGAAGGGACAGAGACAGGCCAGGGTT
CCCTGGCCTTCCAGTCTACCTGAAACTGCAAGTTCCAGGTTCAGTAAGAAACCCTGTTTTAGAAAAATCA
AGTAGAGTGCTTGGTACACACACACACACACACACACACACACATTAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5327150 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5327150 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:6968 same embryo
 EMAGE:6964 same embryo
 EMAGE:6966 same embryo
 EMAGE:6963 same embryo
 EMAGE:6967 same embryo
 EurExpress:euxassay_002493 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS