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EMAGE:7445

Fkbp4 FK506 binding protein 4 ( MGI:95543)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7445 EMAGE:7445 EMAGE:7445 EMAGE:7445 EMAGE:7445
"Pseudo-wholemount" of euxassay_004522. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004522_01 euxassay_004522_02 euxassay_004522_03 euxassay_004522_04
EMAGE:7445 EMAGE:7445 EMAGE:7445 EMAGE:7445 EMAGE:7445
euxassay_004522_05 euxassay_004522_06 euxassay_004522_07 euxassay_004522_08 euxassay_004522_09
EMAGE:7445 EMAGE:7445 EMAGE:7445 EMAGE:7445 EMAGE:7445
euxassay_004522_10 euxassay_004522_11 euxassay_004522_12 euxassay_004522_13 euxassay_004522_14
EMAGE:7445 EMAGE:7445 EMAGE:7445 EMAGE:7445 EMAGE:7445
euxassay_004522_15 euxassay_004522_16 euxassay_004522_17 euxassay_004522_18 euxassay_004522_19
EMAGE:7445 EMAGE:7445 EMAGE:7445 EMAGE:7445 EMAGE:7445
euxassay_004522_20 euxassay_004522_21 euxassay_004522_22 euxassay_004522_23 euxassay_004522_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7445Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7445_wholemount_strong.wlz
7445_wholemount_moderate.wlz
7445_wholemount_weak.wlz
7445_wholemount_possible.wlz
7445_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7445_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5763
Entity Detected:Fkbp4, FK506 binding protein 4 ( MGI:95543)
Sequence:sense strand is shown

>T5763
GCGCGAGCCTGGAGCGCGGTTCGAGGTGGGCAGCGCCGCCTTCCGCCGCACGCCACCCCGTCGCTCACTC
CGGTCGGCGGCCAGAGTGCCGTGCTCGCGCTTGCCACACTCTCGCAGCCAACGGTGCGCCCAGCGGCCAT
GACCGCCGAGGAGATGAAGGCGGCGGAGAACGGGGCGCAGTCGGCGCCCCTGCCTCTCGAAGGAGTGGAC
ATCAGCCCCAAACAGGACGAGGGCGTGCTCAAGGTCATCAAGAGAGAGGGTACAGGCACAGAGACACCCA
TGATCGGGGACCGAGTCTTTGTCCACTACACTGGCTGGCTGCTAGATGGCACAAAGTTTGACTCCAGTCT
GGACCGCAAGGACAAATTCTCCTTTGACCTGGGAAAAGGGGAGGTCATCAAGGCTTGGGATATTGCTGTG
GCAACCATGAAAGTGGGGGAGGTGTGCCACATCACCTGCAAGCCAGAATATGCCTATGGCGCAGCAGGCA
GCCCTCCGAAGATCCCCCCCAACGCCACACTTGTATTTGAGGTGGAGCTGTTTGAGTTCAAAGGAGAAGA
CCTTACAGAAGAAGAAGATGGCGGGATCATCCGCAGAATACGGACTCGGGGTGAAGGCTATGCCAGGCCC
AATGATGGTGCTATGGTGGAAGTGGCCCTGGAAGGCTACCACAAGGACCGCCTCTTTGACCAGCGGGAGC
TCTGCTTTGAAGTCGGGGAAGGGGAAAGTCTAGATCTGCCCTGTGGGCTGGAGGAGGCCATTCAGCGCAT
GGAGAAAGGAGAGCATTCCATCGTGTACCTCAAACCTAGCTATGCTTTTGGCAGTGTGGGGAAGGAGAGG
TTCCAGATCCCACCGCACGCTGAGCTGAGGTATGAAGTGCGGCTGAAGAGCTTTGAGAAGGCCAAGGAGT
CTTGGGAGATGAGCTCCGCGGAGAAGCTGGAGCAGAGCAACATAGTGAAAGAGAGGGGCACCGCGTACTT
CAAGGAAGGCAAGTACAAGCAGGCGTTACTGCAGTACAAGAAGATCGTGTCTTGGCTAGAATACGAGTCT
AGCTTTTCCGGTGAGGAAATGCAAAAGGTCCGTGCACTCCGACTGGCCTCACACCTCAATCTGGCCATGT
GTCACCTGAAACTGCAGGCCTTCTCAGCTGCCATCGAAAGCTGCAACAAGGCCTTGGAGCTGGACAGCAA
CAACGAGAAGGGCCTGTTTCGCCGGGGAGAGGCCCACCTGGCCGTGAATGACTTTGACCTGGCAAGAGCT
GACTTCCAAAAGGTCCTGCAGCTCTATCCCAGCAACAAAGCCGCCAAGACCCAGCTGGCTGTGTGCCAGC
AGCGGACCCGTAGGCAGCTCGCCCGGGAAAAGAAGCTCTATGCCAACATGTTTGAGAGGCTGGCTGAGGA
GGAACACAAGGTGAAGGCAGAAGTGGCAGCAGGAGACCATCCCACTGATGCTGAGATGAAGGGTGAGCGG
AACAATGTGGCTGAGAACCAGTCTCGGGTGGAGACAGAAGCGTAGCCTGCCTCTTCCGCTGCCCACCTCT
GCAGCTGCTCCCTGCTCCCTTCTTACTCCACCCTGTTAGTTTTGTAAAAACTGAAGAATTTTGAGTGAAA
AAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:2651490 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:2651490 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7447 same embryo
 EMAGE:7443 same embryo
 EMAGE:7446 same embryo
 EMAGE:7444 same embryo
 EurExpress:euxassay_004522 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS