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EMAGE:10773

Gnat2 guanine nucleotide binding protein, alpha transducing 2 ( MGI:95779)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:10773
euxassay_003035_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:10773Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
10773_wholemount_possible.wlz
10773_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:10773_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4303
Entity Detected:Gnat2, guanine nucleotide binding protein, alpha transducing 2 ( MGI:95779)
Sequence:sense strand is shown

>T4303
GCTCGGGTAAGGAGTCTCAAGGCAAGATAGGAAAAATTTAAGAGCCAGAGGGAACGTCCCTTCTCAGAGG
AGACAGCAGAAATGGGGAGTGGCATCAGTGCTGAGGACAAAGAACTTGCCAGGAGGTCCAAGGAGCTGGA
GAAGAAGCTGCAGGAGGATGCTGACAAGGAAGCCAAGACTGTCAAGCTGCTGTTGCTCGGTGCGGGCGAG
TCAGGGAAGAGCACTATCGTCAAACAGATGAAGATCATTCACCAGGATGGCTACTCACCCGAAGAGTGCC
TAGAGTTCAAGTCTGTCATCTATGGGAACGTGCTGCAGTCCATCCTGGCCATCATCAGAGCCATGTCCAC
ACTAGGCATTGACTATGCAGAGCCAAGCTGTGCGGATGCCGGGAGACAGCTCAACAACCTGGCTGACTCC
ACCGAGGAGGGGACCATGCCTCCTGAGTTGGTGGACGTCATCAGGAAGTTGTGGAAGGACGGTGGAGTTC
AAGCCTGCTTTGACAGAGCTGCAGAGTTCCAGCTCAATGACTCGGCATCTTACTACCTGAACCAGCTGGA
CCGGATTACAGACCCTAACTACCTCCCTAACGAGCAGGACGTGCTTCGATCCAGAGTCAAGACAACAGGC
ATCATCGAGACCAAGTTTTCTGTTAAAGATTTGAATTTCAGGATGTTTGATGTGGGAGGGCAGAGATCAG
AGAGGAAGAAATGGATCCACTGCTTCGAGGGAGTCACCTGCATCATTTTCTGTGCGGCCCTCAGTGCCTA
CGACATGGTGCTGGTGGAGGATGACGAAGTGAATCGCATGCACGAGTCTTTGCATCTGTTCAACAGCATC
TGCAACCACAAGTTCTTTGCGGCTACGTCCATCGTTCTCTTTCTCAACAAGAAGGACCTCTTTGAGGAAA
AAATTAAGAAAGTCCACCTCAGTATCTGTTTTCCGGAGTATGACGGAAACAACTCCTATGAGGATGCCGG
GAATTATATCAAGAGTCAGTTCCTTGACCTCAACATGAGGAAAGATGTCAAAGAAATCTACAGTCACATG
ACCTGTGCTACAGACACACAGAACGTCAAATTCGTGTTCGATGCAGTTACAGACATCATCATCAAAGAAA
ACCTCAAGGACTGTGGGCTCTTTTAATGCTCAGTTCCTCGAATATACATTCTATAAGCAAGCTTAGAATC
TGAGGCTTCATGCAGAAAATTAGTTCGCATGTACCAGAATGTGTCAAATCAGCCCATCCTGTTGGTGATA
GAGAAGGCATGCTCAGGACTGTTAGCAGTGTGGCCAGTTCACTGTAACGAAGGCATGGCCAGCGACCCTA
ACGCCCAGGTTCCAAGGCTGGTTCTGTTTAGTATAAGAACAGAAAAGCTTCATTTCTCCGATGCAGAAGT
CCCAGTCTGTATGATGAAGGTAACTTCCCTGCCTACTTCACAGGGTCACTCTGAAGAGCACAGACCTAAC
TGAAGGGGAGGCCCAGGGTAGCTGGCTGCTGTGGTTGGCCACAGAAAGCGGCCATGACAGCTGCCTGATG
GACTACCATACTTGGTTATTAGAAGAAACCACCCCAAAGCCTAACAGCAAGCCTTCCTTACGTTGAGCGA
TAAAGTATTAAAAATTAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4506728 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4506728 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:10774 same embryo
 EMAGE:10772 same embryo
 EMAGE:10771 same embryo
 EurExpress:euxassay_003035 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS