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EMAGE:10977

Tlcd2 TLC domain containing 2 ( MGI:1917141)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:10977 EMAGE:10977 EMAGE:10977 EMAGE:10977 EMAGE:10977
"Pseudo-wholemount" of euxassay_003091. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_003091_01 euxassay_003091_02 euxassay_003091_03 euxassay_003091_04
EMAGE:10977 EMAGE:10977 EMAGE:10977 EMAGE:10977 EMAGE:10977
euxassay_003091_05 euxassay_003091_06 euxassay_003091_07 euxassay_003091_08 euxassay_003091_09
EMAGE:10977 EMAGE:10977 EMAGE:10977 EMAGE:10977 EMAGE:10977
euxassay_003091_10 euxassay_003091_11 euxassay_003091_12 euxassay_003091_13 euxassay_003091_14
EMAGE:10977 EMAGE:10977 EMAGE:10977 EMAGE:10977 EMAGE:10977
euxassay_003091_15 euxassay_003091_16 euxassay_003091_17 euxassay_003091_18 euxassay_003091_19
EMAGE:10977 EMAGE:10977 EMAGE:10977 EMAGE:10977 EMAGE:10977
euxassay_003091_20 euxassay_003091_21 euxassay_003091_22 euxassay_003091_23 euxassay_003091_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:10977Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
10977_wholemount_strong.wlz
10977_wholemount_moderate.wlz
10977_wholemount_weak.wlz
10977_wholemount_possible.wlz
10977_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:10977_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4878
Entity Detected:Tlcd2, TLC domain containing 2 ( MGI:1917141)
Sequence:sense strand is shown

>T4878
GCCCCAGGCACAGCAGGGTGGAAAAGCTAGATCCCGATTCTGCCGGAGGGGGGCCCCTTCGAGGTCCCGG
GCACCGGGTGCCAGGATCAGAGAAACTGACTGAAACCTAGCTGACCTGCCCAGACCATGGCATCCTGGGG
ACTCCTTGTGGCTGGCGCTTCCTTCACGGCGTTTCGGGGACTGCACTGGGGGCTGCAGCTGCTGCCCACC
CCGAAATCTGTTCGGGACCGCTGGATGTGGCGGAACATTTTCGTTTCGCTGATACACAGCCTACTCTCTG
GAGTAGGGGCGCTGGTCGGGCTGTGGCAGTTTCCTCAAATGGTCACCGACCCAATTAATGATCACCCACC
GTGGGCACGGGTCCTAGTAGCAGTGTCAGTGGGTTATTTCGCTGCAGATGGAGTTGATATGCTGTGGAAC
CAGACATTGGCCCAGGCCTGGGACCTTCTCTGTCACCATTTGGCGGTAGTGAGCTGCCTCAGCACCGCTG
TTGTGTCTGGCCACTATGTGGGCTTCTCTATGGTATCCCTGCTTCTGGAGCTGAACTCCATCTGTTTGCA
TCTACGGAAGCTACTGCTGCTCTCCCATAAGGCCCCATCCTTGGCCTTCAGAGTAAGCAGTTGGGCCAGC
CTGGCCACCCTGGTCCTCTTCCGCCTTCTGCCTCTGGGATGGATGAGTCTGTGGTTGTCCCGGCAGCACT
ACCAGCTGTCTCTTGCTCTGGTTCTGCTTTGTGTGGCTGGGCTGGTCACCGTGGGCAGCATAAGCATCTC
CACAGGGATCCGAATTCTGACCAAGGATATCTTGCAGTCTCAGCCCTACCCGTTTATCCTCATGCACAAG
GAAACCAAGACACGTGAGCCTGTTGCCAGGAACACTTCCACTCTCAGTCTGAAAGGCTCCAGATACCTGT
ACTCCACTGCTGCTGCTGCTCTTGGTGGTCATCTCATGGTACTGGCATCTCCAAAACGCTGCATGACCCC
TTCAGTCCTGGGCCTTCAAGAGAGAAGACTAGAGCCTGGCAAAGTGGCACATGCTGATAATGCTAGCACT
TGGGAATGACAAGCAGAAGGATCAGAAGTTCAAGGCCAGCCTGGGCTACAAGAGACTCTGTTTCAACAAA
CAAACAAACAAACAAACCAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5098319 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5098319 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:10976 same embryo
 EMAGE:10978 same embryo
 EMAGE:10979 same embryo
 EMAGE:10975 same embryo
 EMAGE:10980 same embryo
 EurExpress:euxassay_003091 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS