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EMAGE:11169

Plekho2 pleckstrin homology domain containing, family O member 2 ( MGI:2143132)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:11169
euxassay_003395_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:11169Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
11169_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:11169_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6728
Entity Detected:Plekho2, pleckstrin homology domain containing, family O member 2 ( MGI:2143132)
Sequence:sense strand is shown

>T6728
CGGACGCGTGGGCCGGCTGCGCGTAGATGGAGCAAGCGGAGCCCGCGCAACGCGGGCAGCAGTAAGCGGC
GAAGCCGCCGGACCTTGCAAACTCGCCATGGAGGAGGAGAGTATAAAGGAGGGGAGCGAGAAGCCTCGTG
GAGCACGGACTGCAGACAAGGCTGGCTGGATCAAGAAGAGCAGTGGGGGGCTTCTGGGTTTATGGAAAGA
CCGCTACTTGCTTCTCTGCCAAGCCCAGCTGCTGGTCTACGAGAATGAGGATGAGCAGAAATGTGTAGAG
ACGGTGGAACTTGGGAGCTATGAGAAGTGCCAGGATCTCCGGACTCTCCTCAAGCGGAAACATCACCGCT
TTATCCTGCTGCGATCCCCAGGGAACAAGGTCAGTGACATCAAATTCCAGGCCCCCAGTGGGGAAGAAAA
GGAATCCTGGATCAAAGCTCTCAACGAAGGGATCAACCGAGGCAAGAACAAGGCTTTTGATGAGGTAAAA
GTAGACAAGACCTGTGCCCTAGAGCATGTGACACGGAACCGGGTACGTGGGGGCCAGCGGCGGCGGCCAC
CAACAAGAATCCACTTAAAGGAGGTAGCCAGTGCGGCTTCTGATGGGCTTTCACGGCTGGACCTCGATGT
CCCAGACAGTGGACCACCAGTGTTTGCTCCTCTCAGTGACATCAGTGAAGACCAGCCCCAGGAGCCACCT
CGGGCTCTCATGCCTCCTGTCAAGCCTTCCCCAGGACCAGAGACCTCTGCAGTTGAGGACAGCAAGGAGA
CTCCTGCAGGAGAGAGAGCCCTAACCCCTGACTCTGCAAGCTCTGGGGCCAATCCTGAGAGCCAAGAGGA
TGCAGAGACCCCAGCAAAGGAGGACAGTGACGTGAAAAGTCTCCCCAACAGCACCTTGTCTGAGAAACTG
AAGGTGAGCTGGGAGAACCCCAGCCCAGAGAAGCCTTCTGCTCCTGAGAGTGCACAGTTGTCCTCTTCGG
AGACTCCAGAGGCTACCCCCAGGGAGAGCAAAAAGCCCCCTGCACCCCCTCCCAAGATCCTGTCGGAGAA
GATGAAGGCTTGTATGAGTGGAGTGGATGCTTCTGGTTCATCCCAGAGTTCTGAGGCCCCCGAGACCACT
TCCCCAGAGCCGACCCAGGTGTCTGTGAATGGCATGGATGATGGTCCTGAGTCGGCCTTACAGGCCATGG
GCATCCCTGGACCTGCCCCAGAGGATGCGGCAGCATCCCCAGCACTGCCCTTCTCGGACTTGCCATCCCA
GTTTCATCCTCGCTCCTCTTCCCTTGGGGACCTACTCAGAGAAAGCCCTCAGCATCCACGACTGCCCAAG
GAGAAGTTGTATCGGGCCCAGCTGGAAGTCAAGGTGGCTTCGAAACAGACAGAGAAATTGTTGAACCAGG
TGCTGGGCAGCGAACCACCGCCTGTGTGTGCCGAGTCATTGCTCAGCCAGGCTGTAGAGCAACTGAGGCA
GGCCACACAAGTCCTGCAGGAAATGAGGGATTTGGGAGAACTGAACCAAGAAACCCCTGGGCTAGTGCAA
AAACGGAAGGAGCTGGTGACCCTCTACAGGAGAAGTGCACCCTAGGCCTGCTAAGCCCTAGGCACCTACC
CCCCAAGTACCCCCATCTGTCACTACCCAACCTTGCTAAGAAATGAGCTACAGCTCAGACTGTAGACGCA
CCACTGGGTACATCAAGTTTGGCCAGGACTTGAGGCTCCTGATGGCCTTTCTACTCTACCCTAGCCTGGG
GCTACCTGTCTGGCCTCTTCTCTAGGCTCTGGGCTTGGGATGGAGCATAGTCCTGTGGTCTGTGTGGTTG
ATGCAGACTGCCCCCAGGGCTTTGGCACCATGGTTGGAGTTTCCAGGATGGCACCGTCTGTTCTCACTGC
CAACGGTTTACATTCCTGACTTCCGGGTAGAGCCCAGCTGACCTGCCTGAGGCTCCCATCTTCTGGTCTT
CAGGCAGATTCCCACCAGCCACACCCACTTAAGAGTATCTAGAGGGGCCTTGGGTCTGGCTGTAGTGAAA
TATGTGGCCTTTAGCTGGAGCCTAAAGATGGCTAAGGGTCTGGGTGAAGGGGCTCTTTACTCTGGTTTGT
TGCCCTCTCTGCAAATCGAGGGTCTTCTCTGCAGCATCCCTACCCCTGTTGGAGAGCTGTAATTAGATGC
TCAGATCTCAAGGCTTCCGAGGGGGGAAGAGAAACTCAGGCTTCCTGGTACAGTCTCTGCTTCTGGGCCA
GCTTCTGTCCAGCCTTGCACATTCCTGAAGATGAAAACCCTAGAGTGGGCCTGTGTTAACAGTTGAAAAG
CCTGTATGAAATTATCATTAATCAACCTTTAGAGGCCCCACCCCCCACCCCTGCCTTCTGTGCCTCCCAG
ATGGGATTTATCAGAGTCTCTGTGGTTCTTCCTCAGCTGGAACCGTTCTGATAGCCACCCCTTTTTTTCC
ACATGCTGGAGTCTGATCCACCTATCAGGCCCCTGGTGGGCTGCCCCTCCTTTACTTCCTAGTGAGAGGA
GTGTTTTCTCTCCTCCCTTTCCCTCCTCCCTTCCCCGTTGCCTCTGGCTCTCTGAGCGACCCTTGAGTCT
CCAGCACACTGCTGTGGCAGCCAGCAGGACTGGGCAGGACCTCGCTGGAGGAAGGAGCGGTCACAGAATC
TGCCCTGAGGATTCCGCGTGTGCACTTTGTTTACTGGAAGAGAAGGGAGGGTCACAGCCACATGATGGCC
TTTCCTCTCACCCTGCTCCCAGTCGCCAGTTGTGCCCACCAAGGCCTGCCAACCAGTGCAGGTTGATGCC
TTCATTATTGTACTGGCCCTTTCTAGCTGTGGGGAGTGGACAGGGGCAGAGTAAACAGCCTTGTCTTGCC
TCACGGCCCCTCCCCCCACCCCCGTCAGCCTCAAACCTCACTCCTTGGGCTCCTATGCCAGCCTGCCTTT
CCCTCCATCTCCTGTACAAGAGCAAGAATGTCCTCAGGTGTCCAGTCTTGATCCCCTGCCATCTTCCCTT
GGGAACAATCATCCCCTACAGCAACAAGGGTGCTGTACTTCTTCCAAGTCACCTGCTTCCAGGAATTAGA
GCCCGGCCGTGCTGTCAAGCGACTAGTCAAGTCGACTAGTCGGGCAAGTAGTTCTGGGGTTACTGCCTTC
ATGGCCAGTGCCATTGCCATTGGTCCCCATGCTGGTGGGGTGGAGTGGGGATGGGGACTGCCAAGGCTGT
CTCCCTGCCCTTACGATCCACCTTTCTTGTCATTTGGCAATAAACCTCATTTTATGGAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3668775 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3668775 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:11166 same embryo
 EMAGE:11164 same embryo
 EMAGE:11168 same embryo
 EMAGE:11165 same embryo
 EMAGE:11167 same embryo
 EurExpress:euxassay_003395 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS