Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:14083

Gdpd2 glycerophosphodiester phosphodiesterase domain containing 2 ( MGI:1918834)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14083 EMAGE:14083 EMAGE:14083 EMAGE:14083 EMAGE:14083
"Pseudo-wholemount" of euxassay_001733. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_001733_01 euxassay_001733_02 euxassay_001733_03 euxassay_001733_04
EMAGE:14083 EMAGE:14083 EMAGE:14083 EMAGE:14083 EMAGE:14083
euxassay_001733_05 euxassay_001733_06 euxassay_001733_07 euxassay_001733_08 euxassay_001733_09
EMAGE:14083 EMAGE:14083 EMAGE:14083 EMAGE:14083 EMAGE:14083
euxassay_001733_10 euxassay_001733_11 euxassay_001733_12 euxassay_001733_13 euxassay_001733_14
EMAGE:14083 EMAGE:14083 EMAGE:14083 EMAGE:14083 EMAGE:14083
euxassay_001733_15 euxassay_001733_16 euxassay_001733_17 euxassay_001733_18 euxassay_001733_19
EMAGE:14083 EMAGE:14083 EMAGE:14083
euxassay_001733_20 euxassay_001733_21 euxassay_001733_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14083Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14083_wholemount_strong.wlz
14083_wholemount_moderate.wlz
14083_wholemount_weak.wlz
14083_wholemount_possible.wlz
14083_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14083_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4092
Entity Detected:Gdpd2, glycerophosphodiester phosphodiesterase domain containing 2 ( MGI:1918834)
Sequence:sense strand is shown

>T4092
CCACGCGTCCGGCCAGCTCCAGAGAGTAAAGAAGCCGACCTCCTCTCCAGCTAGCTCACTCGCTCATCTT
CCCACCATGACTGTGCTCGAGCCATAGCGCCTCTCCCGGCCTTCCAAGAGGACCCACACTTCTTCCTGTA
GGTGGCAACAGTGACACCTGTTTGACCAGTGAGGCTGAGCCAGGGACTGCAAGAGGGAGGAGGCAGACAA
CTCGGAGAGGAGCTGGGAGGCAGAGCTGCGGGCTTGCTTGCTCACTGTGTAAAAGGCCTTAACCATGGCA
GATTCCCCCGGCTGCTGCTCCATCTGGGCCCGCTGCCTCCACTGCCTGTACAGCTGCCACTGGAGGAAAT
ATCCTAAACAGAAGATGCAAACCAGCAAGTGCGACTGTATCTGGTTTGGCCTGCTCTTCCTCACCTTCCT
CCTGTCCCTGGGATGGCTGTACATCGGGCTCATCCTTCTCAATGATCTGCACAACTTCAATGAATTCCTG
TTCCGCCATTGGGGACACTGGATGGACTGGTCCCTGATAGTCCTGCTGGTCGTCTCTCTCCTGGTCACAT
ATGCATCCTTGCTATTGCTCCTGGGCCTGCTCCTGCAACTCTGTGGACAGCCTCTGCATCTTCACAGTCT
CCACAAGGTGCTGCTGCTCCTCATTGTACTTCTAGTGGCCGCGGGACTGGTGGGCCTGGATATCCAATGG
CGGCAGGAGTGGCATAGTTTACGACTGTCACTGCAGGCCACAGCCCCATTCCTTCACATTGGAGCAGTTG
CTGGAATCACCTTGTTGGCCTGGCCTGTGGCTGATACCTTCTACCGCATCCACCCAAGAGGCCCCAAGGT
TCTGCTACTGTTGCTATTTTTTGGAGTCACTCTGGTCATCTACCTGATGCCGCTGCTGTTCATCTCTTCC
CCCTGCATCATGAAACTCAGAGATTTACCCCCCAAGCCTGGGCTGGTGGGACACCGAGGGGCCCCCATGC
TGGCCCCTGAGAATACCCTGATGTCCCTGAGGAAGACAGCTGAATGTGGAGCGGCTGTGTTTGAGACAGA
TGTGATGGTCAGCTCTGACGGAGTCCCCTTTCTCATGCATGATGAGCGACTGAGCAGGACTACCAATGTA
GCCTCTGTGTTTCCAGAGCGAATCTCAGCCCACAGCAGTGACTTCTCCTGGGCTGAACTGCAGAGACTCA
ATGCTGGAACCTGGTTCCTAGAGAGGCAACCTTTCTGGGGGGCCAAAAAGCTGTCAGGCTCTGATCGGAA
GGAGGCTGAGAATCAGACCATACCAGCATTAGAAGAACTACTGAAGGAAGCAGCAGCTCTCAACCTTTCC
ATCATGTTTGACTTGCGCCGACCCCCAAGAAACCACACATACTATGATACTTTTGTGAATCAGACACTGG
AGGCTGTGTTGAGTGCAAACGTGTCCCAAGCTATGGTTCTTTGGCTCCCAGATGAAGACCGTGCTAACGT
GCAGCAACGCGCCCCCAGAATGCGCCAGATATATGGACATCAGGGAGGCAATTGGACTGAGAGGCCCCAG
TTTCTCAACCTCCCCTATCAAGACCTGCCAGCATTGGATATCAAGGCCCTGCACCAGGATAATATCTCAG
TGAACCTGTTTGTAGTGAACAAGCCCTGGCTCTTCTCCCTGCTCTGGTGTGCAGGGGTGGATTCTGTCAC
CACCAATGCCTGCCAGCTGCTGCAACAGATGCAGAACCCCCTCTGGCTTCTTCCCCCTCAAAAATACTTA
ATGATTTGGGTGATCACCGACTGTGCCTCCATTCTGCTGCTTTTGAGTATCTTCCTCCTCCGAGGGGGAT
GTGCTAAGAGAAACAGAACAGGCTTAGAAACAGCAGTGCTACTGACCAAGATCAACAATTTCGCCTCTGA
GTGAATGCCGGGCCCAGGCCGCCACCAGCTGCTGTCTAAGGCCTGTGTGCACTGTTCAAAGGGAAGGACA
GGAGCTGAAGTGGAATGTCCTAGAATCAAATGTTTGGAGGAGGGAGCATTGCTAACAGAAGATTTTGAAC
TCAGAGGGCCCTCTGTCCAGATGGTGGGCATGTCTCAAGCTGCCATGGAATTTGCTGCCTTTGGTGTTTG
ACATGAATTAGTCGGAAAGACAGTGACTGACAAGAAGTTACTCCCAAAATGAAATTAAAGCAAGGAAGTG
AGAGAGATTGCCAAGATAATGCATTAGGCTTGTGTGCACATGTACTTGGATAGAAGAAGCAGGGTGTGTC
AGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACAATGGCCTTTCCGGAAGAACTCTTAA
GATGCTGAAGACAGTCCACACTCCATGCCTTCTCTTCTCACCCTCACACTTCATCTTCTTTTCTGCCTAC
AGGCTGGGAGTGAAAAAGCTCATTTAGCAATATAATATTGTGTCTATGGTAGGTTTTTGTTGTGAGCAAT
GAATGGTTCCTGTATCTTGCCTGTTAATCTGTTATTCAATGAATTTTTAATTTGTAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4457335 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4457335 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14082 same embryo
 EMAGE:14084 same embryo
 EMAGE:14081 same embryo
 EMAGE:14080 same embryo
 EMAGE:14079 same embryo
 EurExpress:euxassay_001733 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS