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EMAGE:14145

Mif4gd MIF4G domain containing ( MGI:1916924)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14145 EMAGE:14145 EMAGE:14145 EMAGE:14145 EMAGE:14145
"Pseudo-wholemount" of euxassay_001835. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_001835_01 euxassay_001835_02 euxassay_001835_03 euxassay_001835_04
EMAGE:14145 EMAGE:14145 EMAGE:14145 EMAGE:14145 EMAGE:14145
euxassay_001835_05 euxassay_001835_06 euxassay_001835_07 euxassay_001835_08 euxassay_001835_09
EMAGE:14145 EMAGE:14145 EMAGE:14145 EMAGE:14145 EMAGE:14145
euxassay_001835_10 euxassay_001835_11 euxassay_001835_12 euxassay_001835_13 euxassay_001835_14
EMAGE:14145 EMAGE:14145 EMAGE:14145 EMAGE:14145 EMAGE:14145
euxassay_001835_15 euxassay_001835_16 euxassay_001835_17 euxassay_001835_18 euxassay_001835_19
EMAGE:14145 EMAGE:14145 EMAGE:14145
euxassay_001835_20 euxassay_001835_21 euxassay_001835_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14145Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14145_wholemount_strong.wlz
14145_wholemount_moderate.wlz
14145_wholemount_weak.wlz
14145_wholemount_possible.wlz
14145_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14145_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4447
Entity Detected:Mif4gd, MIF4G domain containing ( MGI:1916924)
Sequence:sense strand is shown

>T4447
GGGGTGGACGGACTGGAAACGCTGGGAGAGAGGGGCTCGGAGCCCTGCTGGTATCAGGATCTGCGGCTTG
GACTGAGCCAGCGTCCTCCGTGCTAGACGATAAAGGCGAGCCTGACGTTTACACCCAGTTCAGTATTTGC
ACCCCGAAATTTACCCTGATACTGACTGTATCAGATCCCAGATCTGGGATAACTCAGATCCCGCTGGGAC
CGTAGGTGAATTCCCGCTTCACTTCTCAGATGTAACCCCAGAAGCCTGGGTTTCCTTCAGCTGAGCAGCA
GGTGGCCACTTGGTGCTCAACTACTCCACCCGAAGCCAAGTTTGGTGGGCACTCAGCCAAGCACTGAACG
CGACAGAAAGTCCAGTTCCACCCGTCCCAAGGCCTGGTCTGCCCGGCCCAGTGCCTACAGGGCTAGAATC
GGGAGCTTTGTGATTCACCCTTGAAGCCTCAACCGTCTTTGCTTCTCAGGTGCTGTCCTTAGTTTCAGGC
CAGTGAAAACCTGCCGGGCTTAGACCGTCATGAGCGAGGCCAGTAGAGATGATTATAAAATCCAGTCTTT
TGATGCAGAGACGCAGCAGCTGCTGAAGACCGCGCTCAAAGATCCAAGTGCTGTGGACTTAGAGAGAGTA
GCCAACGTGATTGTGGACCATTCTCTGCAGGACTGTGTATTCAGCAAGGAAGCAGGACGCATGTGCTACG
CCATCATTCAGGCAGAGAGTAAGCAAGCGGGCCAGAGCGTCTTCCGCCGTGGGCTCCTCAACCGGCTGCA
GAAGGAGTATGATGCGCGGGAGCAGCTCCGAGCATGCTCCCTGCAGGGCTGGGTCTGCTATGTCACCTTT
ATCTGCAACATCTTTGACTACCTGAGGGTGAACAACATGCCCATGATGGCCCTGGTTAACCCTGTCTATG
ACTGTCTCTTCCAGCTGGCCCAGCCTGAGAGTCTGAGCAGGGAAGAGGAGGTGGACTGCCTGGTGCTGCA
GCTGCACCGGGTCGGGGAGCAGCTGGAGAAGATGAACGGGCAGCGCATGGATGAGCTCTTTATCCTAATC
CGGGACGGCTTCCTGCTCCCGACAGACCTCAGCTCCCTGGCACGGCTGCTGCTGCTGGAGATGATTGAGT
TCCGGGCAGCTGGCTGGAAGACCACTCCTGCTGCCCACAAGTATTACTACAGTGAGGTCTCTGACTAAGC
CCAGGTCTGCACATGCCTTCCCGTGACCCTCTTTTCAAGCTGGCACCAGAATCCTTGCTTCAGCCCCTTC
TAGACTTTTTTGACTGCTGTGGTTCTGCCCTCTTCCCTTCCCTCAATCTGGACTTGTCTCCTGGCTGAAG
ACTGACTGTCTTCCTCTCCCCTCAAGTCCTGTTATCTTCCCACCACCTTCCTCCTGGGCCTGACAGGGGA
GAACCAACTAACAAACACTGAACTGTGTAGCCACTGGTGCAACATGACCTTGGTGCCTCAGTTTTCCTGT
CTATAAAATGGGCAATTTTAGCCATTGGTGGAATGCTTTGGGATGTTAAGGGCAAGTTACAAGAAATGGT
GTTTTATATATTTTATAGAGAGACTTTTGTGGAGGAAGCCTGTTTCCTCCAGTCATGAGTGACTGCCTCA
CCAGGTTGGGGTGAGGGTTTTCTAATAAATCTTTTCTGAAACCAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4934728 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4934728 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14144 same embryo
 EMAGE:14142 same embryo
 EMAGE:14143 same embryo
 EMAGE:14146 same embryo
 EurExpress:euxassay_001835 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS