Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:14179

Mrps18b mitochondrial ribosomal protein S18B ( MGI:1914223)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14179 EMAGE:14179 EMAGE:14179 EMAGE:14179
euxassay_003977_01 euxassay_003977_02 euxassay_003977_03 euxassay_003977_04

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14179Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14179_wholemount_strong.wlz
14179_wholemount_moderate.wlz
14179_wholemount_weak.wlz
14179_wholemount_possible.wlz
14179_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14179_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4974
Entity Detected:Mrps18b, mitochondrial ribosomal protein S18B ( MGI:1914223)
Sequence:sense strand is shown

>T4974
GTCAAGATGGCTGCCCCCTTGCGGCACACGCTTCTAAAGCTGGTTCCTACACTCTTACGAAGTTCCTATG
TAGCTCAGGTTCCCCTCCAGACTCTTTGCACCAGAGGCCCTCCTGAAGAAGATGCTCCATCCTCGCTTCC
CGTTTCCCCATATGAGAGCGAGCCTTGGAAGTACCTGGATTCAGAAGAATACCACAACCGCTATGGCTCT
CGCCCTGTTTGGGCTGACTACCGCCGCAACCACAAAGGTGGTGTGCCACCACAGCGGACCCGAAAGACAT
GTATTCGTAACAATAAAGTTGCTGGGAATCCTTGCCCAATCTGCCGGGATCACAAGTTGCATGTTGACTT
TAGGAATGTGAAGCTCTTGGAACAGTTTGTCTGTGCACACACGGGTATCATCTTTCACGCCCCATACACA
GGGGTCTGTATGAAGCAGCACAAGAAGCTGACCCAGGCCATCCAGAAAGCCAGGGAGTGTGGTCTTCTCA
GTTACTACGTCCCCCAGGTTGAGCCCCGGGATGCTGACTTTGGTACTGTGCATGGAGCTGTCAGTGTGAC
TCCACCAGCCCCCACACTGTTGTCAGGTGAACCTTGGTACCCATGGTACAGCTGGCAACAGCCACCAGAG
AGAGAGCTGTCTCGCCTTCGCCGACTCTATCAAGGAAATCTCCTAGAAGAAAGTGGCCCGCCACCTGAGT
CGATGCCAGAGATGCCCACTACACCACCAGCAGAATCCTCCATTGAGCAGCCAGGCTCCCAGAGTGCTTA
GAACTTGTGACCTGGGGAAGTCAGACCAAGGGAGTACTGTCTAGGGCTACGTGGTATCCTGTGTCCTGCA
AAGGGTTCTGTTTTGTGACAGTGGCAGACCCTATAGGGAACTGGCTGGCATGAAGAGAACAAAGCACATT
TGACGTTGAGGGGGACTAGATGTTTATGGGTAACTGGTGAGGACTTACATATAAACTGGAGACTCTTGTG
TATGCCCTTGATGGTGTGTCCCTGATTTAAACCTCCTGGCTCAGCTTTTATACAATAAAGCTGTGTCTCT
TCAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5136720 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5136720 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14183 same embryo
 EMAGE:14182 same embryo
 EMAGE:14180 same embryo
 EMAGE:14184 same embryo
 EMAGE:14181 same embryo
 EurExpress:euxassay_003977 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS