EMAGE mouse gene expression spatial database

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EMAGE:14260

Dyx1c1 dyslexia susceptibility 1 candidate 1 homolog (human) ( MGI:1914935)
TS23 (14.5 dpc)
in situ hybridisation

Data Images


"Pseudo-wholemount" of euxassay_003955. This image has been made by aligning and collapsing the constitutent sections. Information about the method.	euxassay_003955_01	euxassay_003955_02	euxassay_003955_03	euxassay_003955_04

euxassay_003955_05	euxassay_003955_06	euxassay_003955_07	euxassay_003955_08	euxassay_003955_09

euxassay_003955_10	euxassay_003955_11	euxassay_003955_12	euxassay_003955_13	euxassay_003955_14

euxassay_003955_15	euxassay_003955_16	euxassay_003955_17	euxassay_003955_18	euxassay_003955_19

euxassay_003955_20	euxassay_003955_21	euxassay_003955_22

View assay images:
Expression pattern clarity:
Find spatially similar wholemount expression patterns:

Expression Pattern Description

Spatial Annotation:

Annotation colour key:

	strong
	moderate
	weak
	possible
	not detected

wholemount mapping

Download individual expression domains:

14260_wholemount_strong.wlz

14260_wholemount_moderate.wlz

14260_wholemount_weak.wlz

14260_wholemount_possible.wlz

14260_wholemount_not_detected.wlz

(what is wlz format?)

Download all expression domains:

EMAGE:14260_all_domains.zip

Find spatially similar wholemount expression patterns:

EMAGE spatially similar wholemount patterns

Morphological match to the template:

Annotation Validation:

spatial mapping by EMAGE editor

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	T4152
Entity Detected:	Dyx1c1, dyslexia susceptibility 1 candidate 1 homolog (human) ( MGI:1914935)
Sequence:	sense strand is shown >T4152 CGGACGCGTGGGCGACGTAAAGTGGCTGTGCAGTCCCTGGTCCCGCCATGCCAGTGCGAGTGAGCGAATT CAGCTGGCAGCAGACGCCGGCCACGATCTTCCTGTCGCTGCCTCTGCGGGGCGTCTGCGTGCGCGATGCT GACGTATTCTGTGGGGAAAGTTACCTGAAGGTTAACTTTCCTCCATTTTTATTTGAGCTGTTTCTCTATG CTCCCATAGATGATGGGAAGAGCAAAGCCAAGATTGGAAATGACACGATTCTTTTCACATTGTATAAAAA GGAGCCAGTTCTGTGGGATAGCCTTTCTATGCCGGGTGTTGATAAAGAGATGATGCAGAGAATAAGAGAA AAATCTATCTTGCAAGCACAGGAGAAAGCAAAAGAGGCCACAGAAGCAAAAGCTGTTGCCAAGCGAGAAG ACCAGAGATACGCACTAGGCGAGATGATGAAGATTGAAGAAGAAGAGAGGAAAAAAATAGAAGATATGAA AGAAAATGAACGGAAAAAGGCAACTAGCGAATTAGAAGCGTGGAAAGAATGTCAAAAGAAAGCTGACGGA CAAAAAAGAGTCCAGAGGAAGGAGAAACCGCCCGAGAGAAAGCAAGCTGAAGAGACCAAAGCTCTAAAAC CTCGGGGTTTGCCCCGGAAGGCCCCACCCACTCGCCTCCCCACAAGAGGGAGGAATTGGGAAAACATATT TCCTGAGAAGTTAAAGGAAGACAGAGTCCCTGCGCCTCGCTCCGCTGGCAGTATTCAAATCAGCTTTACC CCTCGAGTGTTCCCAACAGCACTTCGGGAATCCCAAGTCGCAGAAGAGGAGGAGTGGCTGCATAAACAAG CAGAAGCACGGAGAGCCATGAGCACTGACCTTCCTGAATTCTTTGACTTAAAAGAAGAAGAGAGGAATCC AGACTGGTTGAAAGACAAGGGAAACAAATTGTTTGCAACAGAAAACTATTTGGCAGCGGTTGATGCATAT AATTTAGCCATACGACTGAACTGTAAGATCCCATTATTGTATTTGAATCGGGCTGCTTGCCACCTCAAAT TAAAAAACCTACACAAGGCCATCGAGGACTCTTCTAAGGCACTAGAGTTATTGACACCACCTGTTGCTGA CAATGCCAATGCAAGAATGAAGGCACACGTCCGACGAGGGACAGCGTTCTGTCAACTAGAATTGTATGTT GAAGGCTTGCAAGATTATGAAGCTGCACTTAAGATTGACCCAGCCAACACAGTTGTACAGAACGATGCAG AGAAGATTCGGAATATAATTCAAGGGACGGCACTGAAGTCTCGTGACTAGAGGCAGCTAGGCACAGGAGT CTCTGCAAGTACTGTAGCTCTGTACAGCACCGCGCTAGTGAGCCTTTGGAATGGCAGTGCCTGACGAATC ATCTCCAAGAGGAAAATGGCCTAGCTCTCACTGCCTTTGATCCCAGTACCGGGAAGGCAGAGGTAGGCAA GTCTCTATGAGCTTGAGGCCAGCCAGAGCTCGACAGCAAGCAAAACACAAAAGAAAGCCAGAGAACAGGC TGTTTGAGTCCTCAATCTTGGCACAGGGATTGGCTGGGCTCTGATGTTGCTGTTGAAATTGCCAGGATAC TACTGAGGAATCTACAGAATAGAATTTCCACATAAAAGATTGTGCATATAAAATATTCTTATTATATTAA ATATAGTATTTCATTCTAAATGATTGGCTTTGGTATAATATGTAAACAAATTTTAGTCACTTATAGATAT ACATAACCACATAGTTTTCTTTGTATCATTTGTCGTTTGAGGCTAGACCAGTTAGAGTATAATATACATT GCATACCAACCCTGGGTCTGCTGGGTAAAAGAATATAGAATTCCAGGCTAGCCTGGGCTACATAGTGAAA CTGTTTCAAGAAAAAGTGAAGAAATAAACAACAGAAAAACCAAAAAAAAAAAAAAA
Notes:	The probe template was PCR amplified from IMAGE:4483015 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4483015 which was retrieved directly from NCBI.
Chemistry:	RNA
Strand:	antisense
Label:	digoxigenin

Specimen

Organism:	mouse
Strain:	C57BL/6
Age:	14.5 dpc
Theiler Stage:	TS23
Mutations:	none (wild-type)
Preparation:	section

Procedures

Fixation:	none
Embedding:	cryosection (OCT)
Staining procedure:	alkaline phosphatase + NBT/BCIP

General Information

Authors:	Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:	Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	screen
References:	[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:	EMAGE:14259 same embryo
	EMAGE:14258 same embryo
	EMAGE:14256 same embryo
	EMAGE:14257 same embryo
	EMAGE:14261 same embryo
	EMAGE:14262 same embryo
	EurExpress:euxassay_003955 same experiment
	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source