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EMAGE:14450

Lrrc29 leucine rich repeat containing 29 ( MGI:2443262)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14450 EMAGE:14450 EMAGE:14450 EMAGE:14450 EMAGE:14450
"Pseudo-wholemount" of euxassay_004267. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004267_01 euxassay_004267_02 euxassay_004267_03 euxassay_004267_04
EMAGE:14450 EMAGE:14450 EMAGE:14450 EMAGE:14450 EMAGE:14450
euxassay_004267_05 euxassay_004267_06 euxassay_004267_07 euxassay_004267_08 euxassay_004267_09
EMAGE:14450 EMAGE:14450 EMAGE:14450 EMAGE:14450 EMAGE:14450
euxassay_004267_10 euxassay_004267_11 euxassay_004267_12 euxassay_004267_13 euxassay_004267_14
EMAGE:14450 EMAGE:14450 EMAGE:14450 EMAGE:14450 EMAGE:14450
euxassay_004267_15 euxassay_004267_16 euxassay_004267_17 euxassay_004267_18 euxassay_004267_19
EMAGE:14450 EMAGE:14450 EMAGE:14450
euxassay_004267_20 euxassay_004267_21 euxassay_004267_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14450Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14450_wholemount_strong.wlz
14450_wholemount_moderate.wlz
14450_wholemount_weak.wlz
14450_wholemount_possible.wlz
14450_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14450_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7200
Entity Detected:Lrrc29, leucine rich repeat containing 29 ( MGI:2443262)
Sequence:sense strand is shown

>T7200
CTGCGATGGCGGACTCGCTGCCTCTGGAGATGCTCACATATATCCTGAGCTTCCTGCCTCTGTCAGATCA
GAAAGAGGCCTCCCTTGTGAGTCGGACCTGGTACTGTGCAGCCCAGAATGCCCTTCGGGAGGTAAGACCT
CACTTGGTCCATTCTTACTTATTCCTCTATTCTCCTTCTCATGGCCCTGCTTATCTATCATCTGTCTATC
CATCCTTATATACTTACACATTCATTCTACTAGTCTCGGGGTGCAGAGCTTGGAGTGCACAGGTGAATAG
AACATCATCTTCCTAAGGAGCACATTGTCCAGTAAAGGAAAATAACAGTTAGCGTGGTACGGTGTGTTCA
GTGCCATATCAATGAAAGTGTGAAACCCAGACAAGGACACCAAGACGAGACCATGCAGTGGCATCAGGGC
AGGCCTGAGAGATAGGATGGGAACACAAGTTACTCTTTCTAGAACGGGCATTAAGGTATGGAAATTCCAC
ATAACTGGATTAAGTTTTTTGTGTGGGATGTGGTAGGAGAAGAGTCAAGAATGTGGTCAAGATGGCAAGG
TGGCAGATGTGCCAGGCAGCAGAGAGAGCTTGGGCTTTCTTCCAGTTACTGCTGTGGGGCCGTAAAGAAA
TGGTAAGACAGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTAACTACACTTCCAGAGGTTCTGAGTT
CAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGAGCCGATGCCCTCTGTGTCTGAAGA
GAGGACAGTGTATTCACATACATAAAATAATAAATATTTGAAAAAAGAAAAGGTAAGACAGGCAAGGACA
GTGTGAAACAGTTCTTAGAACTCCATACTCCAGAATGGGTTAGAGGGTAAGATGGAGGTTGGGGAGGCAG
CCCAGCCAGGAGGGCAACACAAACATCTGTGGTATTTGAAAGCAATAGCTTGTGTTAATTTTTATTTAAT
TAGTTTTGATTTAGTTATAGTGAAGTTAAGGGTTTTTTTGTTTTTTTTTTTGTTTTTTTTTTTTTTGTCT
CATTAGCTATTTGTGTTCTTTATCCACTTAACTGGTAGGGTCTTAGTAATTTGCTTGTATGAACCTTTTA
TATATGAAAAATAAACTCTTTAGCTGGGCAGTGATGGTGCATGCCTTTAGTCCCAGCAGTCAGGAAGCAG
AGGAAGGCAGATCTCTGAGTTCAAGGCCAGCCTGGTCTGCAGAGTAAGTTCCTGGATAGCCAGGGCTGCA
CAGAAAAAAAATCCTGTCACAAACAAACAAACAAACAAACAAACAAACAGAAGAACAAAACAAAAGATTT
ATTCTCTATATATTGGTTAAAATACATTCCTATTTGCTCTTTCATTTTATTTGTAGATAGCAGTGTTTAC
ATATGAGGTACAATATTAAGCTTCTGTGTTCGTTCATCATTGGTTACTTAAAGATCCCTTGCCCCCCAGC
GATGTCATCAATGCATGCTCATATTTTTATTCTTTTAAAGAATATAGCTGATTTTTAGAGTAGTGATTGG
TTCAATAAAAATAAAATTTCTGTTTTATGGTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4038084 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4038084 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14451 same embryo
 EMAGE:14454 same embryo
 EMAGE:14449 same embryo
 EMAGE:14453 same embryo
 EMAGE:14452 same embryo
 EurExpress:euxassay_004267 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS