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EMAGE:14484

Myct1 myc target 1 ( MGI:1915882)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14484 EMAGE:14484 EMAGE:14484 EMAGE:14484 EMAGE:14484
"Pseudo-wholemount" of euxassay_005360. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_005360_01 euxassay_005360_02 euxassay_005360_03 euxassay_005360_04
EMAGE:14484 EMAGE:14484 EMAGE:14484 EMAGE:14484 EMAGE:14484
euxassay_005360_05 euxassay_005360_06 euxassay_005360_07 euxassay_005360_08 euxassay_005360_09
EMAGE:14484 EMAGE:14484 EMAGE:14484 EMAGE:14484 EMAGE:14484
euxassay_005360_10 euxassay_005360_11 euxassay_005360_12 euxassay_005360_13 euxassay_005360_14
EMAGE:14484 EMAGE:14484 EMAGE:14484 EMAGE:14484 EMAGE:14484
euxassay_005360_15 euxassay_005360_16 euxassay_005360_17 euxassay_005360_18 euxassay_005360_19
EMAGE:14484 EMAGE:14484
euxassay_005360_20 euxassay_005360_21

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14484Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14484_wholemount_strong.wlz
14484_wholemount_moderate.wlz
14484_wholemount_weak.wlz
14484_wholemount_possible.wlz
14484_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14484_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8287
Entity Detected:Myct1, myc target 1 ( MGI:1915882)
Sequence:sense strand is shown

>T8287
GGCACGAGGCACAAAGGCATAGAATCAAACTGCTGGTTGTGGACACACTGGCTTCTTTTTCTTGTGGACA
TTATGGCTAATAACACCACGAGCTTAGGGAGTCCTTGGCCAGAAAACTTTTGGGAGGACCTTATAATGTC
CTTCACCGTATCCGTGGCGATTGGGCTTGCAATCGGAGGATTTCTCTGGGCGCTGTTCGTTTTTCTGTCT
CGAAGAAGAAGAGCCAGTGCACCCATTTCGCAGTGGAGTCCCACCAGGAGACCCAGGTCTTCCTACAACC
ACGGCCTCAACAGGACTGGGTTCTACCGCCACAGTGGCTATGAACGGCGAAGCAACCTCAGCCTGGCCAG
CCTCACTTTCCAGAGACAAGCTTCCATGGAGCTGGTCAACTCCTTCCCAAGGAAATCAAGCTTTAGGGCT
TCGACTTTCCATCCCTTCCTGCAATGCCCACCACTTCCGGTGGAAACGGAGAGTCAGCTGATGACCCTGT
CTGCCTCCACCACCCCTTCCACCCTCAGCACCGCACACAGCCCGAGCCGGCCAGACTTCCGCTGGTCCAG
CAACAGCTTGCGGATGGGCCTTTCCACACCGCCCCCACCTGCCTATGAATCCATCATAAAGGCATTTCCC
GATTCCTGAGTCTGAGATTTCGTTGTTTTTAATACTTTAAAAAAAAAAGTCTCTTTTAGAAAGAAAATGA
TATATAGGGTAAGCGGAATTTGGGAGCCACGGCCCCAGTAAGTAATTTTCCAAGTTGATAGGCTCGTGAA
AGCTGAACATTACCGATAAGGCACAGGTTCCTTTTGAACATGTTTTTCTCACTTAGGTCTCACAAAAGTA
TGATTTTTCTCAAAAGTCCTGTATTTATGTATTTTTTGGATTCAGTGTGAGGCATTGAATTAAAGATACC
GATTAAAGATTCTACCCTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:1399480 using vector (pT7T3D-PacI) specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:1399480 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14480 same embryo
 EMAGE:14483 same embryo
 EMAGE:14482 same embryo
 EMAGE:14481 same embryo
 EMAGE:14478 same embryo
 EMAGE:14479 same embryo
 EurExpress:euxassay_005360 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS