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EMAGE:16364

Wnt1 wingless-related MMTV integration site 1 ( MGI:98953)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:16364
euxassay_017193_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:16364Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
16364_wholemount_strong.wlz
16364_wholemount_moderate.wlz
16364_wholemount_weak.wlz
16364_wholemount_possible.wlz
16364_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:16364_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6092
Entity Detected:Wnt1, wingless-related MMTV integration site 1 ( MGI:98953)
Sequence:sense strand is shown

>T6092
GCCACAGCTTCGCTCGCCACTCATTGTCTGTGGCCCTGACCAGTGCGCCCTGGTGCTTTTAGTGCCGCCC
GGGCCCGGAGGGGCAGCCTCTTCTCACTGCAGTCAGCGCCGCAACTATAAGAGGCGGTGCCTCCCGCAGT
GGCTGCTTCAGCCCAGCAGCCAGGACAGCGAACCATGCTGCCTGCGGCCCGCCTCCAGACTTATTAGAGC
CAGCCTGGGAACTCGCATCACTGCCCTCACCGCTGTGTCCAGTCCCACCGTCGCGGACAGCAACCACAGT
CGTCAGAACCCCAGCACAGAACCAGCAAGGCCAGGCAGGCCATGGGGCTCTGGGCGCTGCTGCCCAGCTG
GGTTTCTACTACGTTGCTACTGGCACTGACCGCTCTGCCCGCAGCCCTAGCTGCCAACAGTAGTGGCCGA
TGGTGGGGCATCGTGAACATAGCCTCCTCCACGAACCTGTTGACGGATTCCAAGAGCCTGCAGCTGGTGC
TCGAGCCCAGTCTGCAGCTGCTGAGCCGCAAGCAGCGGCGACTGATCCGACAGAACCCGGGGATCCTGCA
CAGCGTGAGTGGAGGGCTCCAGAGCGCCGTGCGAGAGTGCAAATGGCAATTCCGAAACCGCCGCTGGAAC
TGCCCCACTGCTCCGGGGCCCCACCTCTTCGGCAAGATCGTCAACCGAGGCTGCCGAGAAACAGCGTTCA
TCTTCGCAATCACCTCCGCCGGGGTCACACATTCCGTGGCGCGCTCCTGCTCCGAAGGCTCCATCGAGTC
CTGCACCTGCGACTACCGGCGGCGCGGCCCTGGGGGCCCCGACTGGCACTGGGGGGGCTGCAGTGACAAC
ATCGATTTTGGTCGCCTCTTTGGCCGAGAGTTCGTGGACTCCGGGGAGAAGGGGCGGGACCTACGCTTCC
TCATGAACCTTCACAACAACGAGGCAGGGCGAACGACCGTGTTCTCTGAGATGCGCCAAGAGTGCAAATG
CCACGGGATGTCCGGCTCCTGCACGGTGCGCACGTGTTGGATGCGGCTGCCCACGCTGCGCGCTGTGGGC
GACGTGCTGCGCGACCGCTTCGACGGTGCCTCCCGCGTCCTTTACGGCAACAGAGGCAGCAACCGCGCCT
CGCGGGCGGAGCTGCTGCGCCTGGAGCCCGAAGACCCCGCGCACAAGCCTCCCTCCCCTCACGACCTCGT
CTACTTCGAGAAATCGCCCAACTTCTGCACGTACAGTGGCCGCCTGGGCACAGCTGGCACAGCTGGACGA
GCTTGCAACAGCTCGTCTCCCGCGCTGGACGGCTGTGAGCTGCTGTGCTGTGGCCGAGGCCACCGCACGC
GCACGCAGCGCGTCACGGAGCGCTGCAACTGCACCTTCCACTGGTGCTGCCACGTCAGCTGCCGCAACTG
CACGCACACGCGCGTTCTGCACGAGTGTCTATGAGGTGCCGCGCCTCCGGGAACGGGAACGCTCTCTTCC
AGTTCTCAGACACACTCACTGGTCCTGATGTTTGCCCACCCTACCGCGTCCAGCCACAGTCCCAGGGTTC
ATAGCGATCCATCTCTCCCACCTCCTACCTGGGGACTCCTGAAACCACTTGCCTGAGTCGGCTCGAACCC
TTTTGCCATCCTGAGGGCCCTGACCCAGCCTACCTCCCTCCCTCTTTGAGGGAGACTCCTTTTGCACTGC
CCCCCAATTTGGCCAGAGGGTGAGAGAAAGATTCTTCTTCTGGGGTGGGGGTGGGGAGGTCAACTCTTGA
AGGTGTTGCGGTTCCTGATGTATTTTGCGCTGTGACCTCTTTGGGTATTATCACCTTTCCTTGTCTCTCA
GGTCCCTATAGGTCCCTTGAGTTCTCTAACCAGCACCTCTGGGCTTCAAGGCCTTTCCCCTCCCACCTGT
AGCTGAAGAGTTTCCGAGTTGAAAGGGCACGGAAAGCTAAGTGGGAAAGGAGGTTGCTGGACCCAGCAGC
AAAACCCTACATTCTCCTTGTCTCTGCCTCGGAGCCATTGAACAGCTGTGAACCATGCCTCCCTCAGCCT
CCTCCCACCCCTTCCTGTCCTGCCTCCTCATCACTGTGTAAATAATTTGCACCGAAATGTGGCCGCAGAG
CCACGCGTTCGGTTATGTAAATAAAACTATTTATTGTGCTGGGTTCCAGCCTGGGTTGCAGAGACCACCC
TCACCCCACCTCACTGCTCCTCTGTTCTGCTTGCCAGTCCTTTTGTTATCCGACCTTTTTTCTCTTTTAC
CCAGCTTCTCATAGGCGCCCTTGCCCACCGGATCAGTATTTCCTTCCACTGTAGCTATTAGTGGCTCCTC
GCCCCCACCAATGTAGTATCTTCCTCTGAGGAATAAAATATCTATTTTTAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3493095 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3493095 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:16365 same embryo
 EMAGE:16369 same embryo
 EMAGE:16366 same embryo
 EMAGE:16368 same embryo
 EMAGE:16367 same embryo
 EurExpress:euxassay_017193 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS