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EMAGE:17358

Orc1 origin recognition complex, subunit 1 ( MGI:1328337)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:17358
euxassay_003822_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:17358Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
17358_wholemount_strong.wlz
17358_wholemount_moderate.wlz
17358_wholemount_weak.wlz
17358_wholemount_possible.wlz
17358_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:17358_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7028
Entity Detected:Orc1, origin recognition complex, subunit 1 ( MGI:1328337)
Sequence:sense strand is shown

>T7028
CCACGCGTCCGAGCTACTCCAGTGCCTGGACTGCAAAGCGTCGGCGAGCCCATCAGACCATGCCATCCTA
CCTCACAAGGCAGAAGACCAGACAAACTTTCTCATGGGTTGGCAGGCCATTGCCGAATCGAAAACAGTTC
CAACAAATGTACAGAGAAATTTGTATGAAAATCAATGATGGTTCTGAGATTCACATCAAGGTTGGACAGT
TTGTATTGATTCAGGGGGAAGATAATAAAAAGCCCTATGTGGCTAAACTGATTGAATTATTTCAAAATGG
AGCTGAAGTTCCTCCCAAGAAATGTGCACGAGTACAGTGGTTTGTCAGATTCCTTGAGATTCCTGTCTCT
AAAAGGCACTTGTTAGGCCGCAGTCCTCCTGCACAGGAGATATTCTGGTATGACTGTTCTGACTGGGATA
ACAAGATTAATGTGGAGACCATCATTGGCCCTGTTCAGGTAGTGGCATTAGCCCCAGAAGAAGTGATTCC
TGTGGATCAGAAAAGTGAGGAGACACTGTTTGTGAAGCTATCCTGGAATAAAAAGGACTTTGCACCACTG
CCACCAGAAGTGCTTGCAGCATTAAGGGAACAAGAAGATAGTCCTGAGTGGCAAAAACCTTTAAAAGCCA
AGATTAAGAATGTAAAAAGCCCTGCCCGGAACACAACAGAACAAGAGGTCAAAGGGATCAAATCAAATCA
TTCCACTTCCAAATTTCACCAGACTCCTGCTAATATTGTCATCCCCAGTGCAAAGAAGTCGCTGGAACTC
GATGGCTTAGGTTTTACTAGGAAGCCTAACACGAGGTGGTCAAAGAAGAGCTCGTGTGACTCCTTGGATT
ATCAAAAAACATCTAAAAGAAGAGCAGCCTTCTCTGAGACCACCTCGCCTCCTAAAAAGCCTAATAAACC
TCGTGAAATCAAGCCCTCTTCAGCTTTGGAAACTCGAGTTAAAAATGGACAAACTCAACCTTTTTGTGCC
AAAAGTAGTGTGGTTCTGAGAGCCCGGAACCCAGCTATGACGACCACAAAGCTTGGTGTGGACAACACAC
TTAGCCCTATCAGGAATGGGTTGAGATCTTCAGTGGTGCCCTCTGGGGGTCTGACACCAGTATACATTAG
GAGGAAGGCAAAAGAACAAGAAACTCACAAAGAACCCATCCGTACTTCTCGTGTCCATAGAAAGAGTTCT
CTCTTGACTTTGAAGCGGATTAGGCAACAGCTTTGTCTTCTAGATGGTGATGACAGGGACCAAGAAGAGG
AAGAGTCCGTAGACTCTGAGAGTGAGGAGGAAGATGAGTTTATTTCCTCCCTCCCAACAAGAAATTCCCT
GGGGCAGTCCAGGACCCGGCAGACCCCCTCCAAGTCACCACAGAAAAATCCTAAACCTAGAACACCTCAT
CGTGCCACTCCTCAGATCCGAGACAGAAACCTGGCTGTCCAGGAGCCAGCTAGTGCGCTGGAAGAGGCAC
GGCTGAGGTTGCATGTTTCTGCTGTGCCTGACTCTCTCCCCTGTCGAGAGCAGGAATTCCAAGACATCTA
CAGCTTTGTGGAAAGTAAACTTCTTGATGGGACTGGAGGGTGTATGTACATTTCTGGGGTCCCTGGGACA
GGGAAGACAGCCACTGTGCATGAGGTCATACGCTGTCTGCAGCAGGCAGCAGAAACAGATGATGTTCCTC
CCTTTCAATATGTTGAGGTTAATGGGATGAAGCTAACAGAACCCCACCAAGTCTATGTGCAGATTTTAAA
GAAACTGACAGGCCAGAAGGCAACAGCCAATCATGCAGCAGAACTGCTGGCGAAGCAATTCTGTGGCCAA
GGGTCCCAGAAGGAAACCACTGTACTGCTCGTGGATGAGCTTGACCTTCTTTGGACTCACAAACAAGATG
TAATGTACAACCTCTTTGATTGGCCTACTCACAAAGGGGCCCACTTGATAGTGCTGACCATTGCCAACAC
CATGGACCTTCCCGAGAGGATCATGATGAACCGTGTGTCTAGCCGACTGGGCCTCACCAGGATGTCTTTC
CAGCCCTATTCTCACAGCCAGCTGAAACAGATCTTAGTGTCTCGACTGAGGAATTTAAGGGCCTTTGAGG
ACGATGCCATCCAGCTGGTGGCCAGGAAGGTAGCAGCCCTCTCTGGAGATGCCCGGCGCTGCCTGGACAT
CTGCAGGCGTGCCACGGAGATCTGCGAGCTTTCCCATCTACGCGGTGACTCTCTGAGCCTGGTGACTGTG
GCCCACTTAATGGAAGCTATAGATGAAATGTTCTCCTCGTCATATATTACTGCCATCAAAAACTCTTCTG
TCGTGGAACAGAGCTTCCTGAGAGCCATTATTGCGGAATTCCGTCGGTCAGGACTAGAGGAAGCAACCTT
TCAACAGATATACAGTCAGCACGTGGCTCTGTGCCGAATGGAGGGACTGCCATACCCAACCATGTCAGAG
ACCATGGCTGTGTGCTCACGTCTGGGTTCTTGCCGCCTCCTTCTGGTGGAGCCCAGTAGAAATGACCTCC
TCCTTCGAGTGAGACTCAATGTTAGCCAGAATGACGTGCTGTTTGCTCTCAAAGAAGAGTGAAGGACTTC
ACAAATTTCTGCTTTGTCTCAGAGCTTTATTTTATTTCTTCAGAACATGGAATTACAGCAGAATATACAG
GATGGAAATTGTTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3995330 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3995330 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:17360 same embryo
 EMAGE:17362 same embryo
 EMAGE:17359 same embryo
 EMAGE:17363 same embryo
 EMAGE:17361 same embryo
 EurExpress:euxassay_003822 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS