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EMAGE:19376

Nip7 nuclear import 7 homolog (S. cerevisiae) ( MGI:1913414)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:19376 EMAGE:19376 EMAGE:19376 EMAGE:19376 EMAGE:19376
"Pseudo-wholemount" of euxassay_002152. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_002152_01 euxassay_002152_02 euxassay_002152_03 euxassay_002152_04
EMAGE:19376 EMAGE:19376 EMAGE:19376 EMAGE:19376 EMAGE:19376
euxassay_002152_05 euxassay_002152_06 euxassay_002152_07 euxassay_002152_08 euxassay_002152_09
EMAGE:19376 EMAGE:19376 EMAGE:19376 EMAGE:19376 EMAGE:19376
euxassay_002152_10 euxassay_002152_11 euxassay_002152_12 euxassay_002152_13 euxassay_002152_14
EMAGE:19376 EMAGE:19376 EMAGE:19376 EMAGE:19376 EMAGE:19376
euxassay_002152_15 euxassay_002152_16 euxassay_002152_17 euxassay_002152_18 euxassay_002152_19
EMAGE:19376
euxassay_002152_20

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:19376Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
19376_wholemount_strong.wlz
19376_wholemount_moderate.wlz
19376_wholemount_weak.wlz
19376_wholemount_possible.wlz
19376_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:19376_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6035
Entity Detected:Nip7, nuclear import 7 homolog (S. cerevisiae) ( MGI:1913414)
Sequence:sense strand is shown

>T6035
GGCTCTCCAGGCACGAGGATTCCCGGGAGCCAAGCAAGCGGCAAGATGAGGCCCTTGACTGAAGAAGAGA
CCCGGGTCATGTTTGAGAAGATCGCGAAGTACATCGGAGAGAACCTGCAACTCCTAGTGGACAGACCCGA
CGGCACGTACTGTTTCCGGCTGCACAACGACCGAGTGTACTATGTGAGTGAGATGATGCTGAAGCTGGCC
GCCAACATCTCCGGAGACAAGCTCGTGTCGCTGGGGACGTGTTTTGGGAAGTTTACCAAGACCCACAAGT
TCCGCTTGCACGTGACAGCTCTGGATTACCTGGCCCCCTATGCCAAGTATAAAGTGTGGGTAAAGCCGGG
AGCAGAGCAGTCCTTCTTGTATGGAAACCATGTGTTGAAATCCGGTCTGGGTCGAATTACTGAGAACACA
TCTCAGTACCAGGGAGTGGTTGTCTATTCCATGGCGGACATTCCTCTGGGTTTTGGGGTGGCAGCAAAGT
CTACCCAAGACTGCCGAAAAGTGGACCCCATGGCAATTGTGGTGTTCCACCAAGCAGACATTGGGGAGTA
CGTACGCCATGAAGAGACACTGACTTAGGACGGTCATTCCAAGAACATTTTGCTGTGTGAGAGGACTTAG
CTTTGTTTCCTGTGTGCGGCCATCAGATTAAATCTGGACAACACTGAGATACGCAACTTGGGTTCTTATC
AACAGAAATGGCGTGAAAACAGGGTCTCTGGCCCTCTAGAGTCAAAAGCAGGTGGATCACAAGTATAAGG
CCAGCTCAGGCTACTTGGAGAGTTCAAGGCTAGCCTGGGCTACATAGTGAGCCTTGTCTCAAAAATCTAA
AACAGACAAACCAGAACCTGAGAGTGTTTTGTGTGAGTAAATAGCGTGTTTCTGTTTTGTGTCTGCGTCG
CCTTTGTTTGGATCAGAAGACTTGCTCTGAGTGATGGTTTCTAAGTTACTTCACTGAGGACAGGAGCCAT
CTTACTGTTATCTGTGATAACACTGTTTTCCAGGCTCATGATAGCACAGTGGACTTTCTATTGTGTGTTA
ATGTTAAAGGTAGAAACGGCCATATGAGCCTCTGGTTTTACATATGGAATTTAATAAATTTTAATGGTTT
TATATTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3488726 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3488726 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:19375 same embryo
 EMAGE:19373 same embryo
 EMAGE:19374 same embryo
 EMAGE:19372 same embryo
 EMAGE:19371 same embryo
 EurExpress:euxassay_002152 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS