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EMAGE:19438

Psmc2 proteasome (prosome, macropain) 26S subunit, ATPase 2 ( MGI:109555)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:19438 EMAGE:19438 EMAGE:19438 EMAGE:19438 EMAGE:19438
"Pseudo-wholemount" of euxassay_004830. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004830_01 euxassay_004830_02 euxassay_004830_03 euxassay_004830_04
EMAGE:19438 EMAGE:19438 EMAGE:19438 EMAGE:19438 EMAGE:19438
euxassay_004830_05 euxassay_004830_06 euxassay_004830_07 euxassay_004830_08 euxassay_004830_09
EMAGE:19438 EMAGE:19438 EMAGE:19438 EMAGE:19438 EMAGE:19438
euxassay_004830_10 euxassay_004830_11 euxassay_004830_12 euxassay_004830_13 euxassay_004830_14
EMAGE:19438 EMAGE:19438 EMAGE:19438 EMAGE:19438 EMAGE:19438
euxassay_004830_15 euxassay_004830_16 euxassay_004830_17 euxassay_004830_18 euxassay_004830_19
EMAGE:19438 EMAGE:19438 EMAGE:19438 EMAGE:19438 EMAGE:19438
euxassay_004830_20 euxassay_004830_21 euxassay_004830_22 euxassay_004830_23 euxassay_004830_24
EMAGE:19438 EMAGE:19438 EMAGE:19438 EMAGE:19438
euxassay_004830_25 euxassay_004830_26 euxassay_004830_27 euxassay_004830_28

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:19438Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
19438_wholemount_strong.wlz
19438_wholemount_moderate.wlz
19438_wholemount_weak.wlz
19438_wholemount_possible.wlz
19438_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:19438_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6530
Entity Detected:Psmc2, proteasome (prosome, macropain) 26S subunit, ATPase 2 ( MGI:109555)
Sequence:sense strand is shown

>T6530
GAAACGTGCTGTGTAATCACCGAGACGCGGAGGCACTTGCGGCTTCTAAAATGCCGGATTACCTAGGTGC
GGACCAGCGGAAAACCAAAGAGGAGGAGAAGGACGACAAGCCCATCCGAGCTCTGGATGAAGGGGATATT
GCCTTGCTGAAAACTTACGGCCAGAGTACTTATTCAAGGCAGATCAAGCAGGTTGAAGATGACATTCAAC
AACTTCTCAAAAAAATTAATGAGCTCACTGGTATTAAAGAGTCTGACACTGGGTTGGCACCTCCGGCCCT
CTGGGATTTGGCTGCAGACAAACAAACACTTCAGAGTGAACAGCCATTACAGGTGGCAAGATGTACGAAG
ATAATCAACGCTGATTCGGAGGACCCAAAATACATCATCAATGTGAAGCAGTTTGCCAAGTTCGTGGTGG
ATCTCAGTGATCAGGTGGCACCCACTGACATTGAAGAAGGGATGAGAGTCGGTGTGGACAGAAATAAATA
CCAAATTCACATTCCACTACCTCCTAAGATCGACCCAACAGTTACCATGATGCAGGTGGAGGAAAAACCC
GACGTCACATACAGTGATGTTGGTGGTTGTAAGGAACAGATTGAGAAATTGCGAGAAGTAGTTGAAACCC
CTCTGCTCCATCCAGAGAGGTTTGTTAACCTTGGAATCGAGCCTCCAAAGGGTGTACTGCTGTTTGGGCC
ACCAGGCACAGGCAAGACACTCTGTGCTAGGGCAGTTGCCAATCGGACTGATGCTTGCTTCATTCGAGTT
ATTGGGTCTGAGCTCGTACAGAAATACGTCGGCGAGGGAGCTCGAATGGTTCGTGAGCTTTTTGAAATGG
CCAGGACAAAAAAAGCCTGCCTTATTTTCTTTGATGAAATTGATGCCATTGGAGGGGCTCGGTTTGACGA
TGGTGCTGGGGGTGACAATGAAGTGCAGAGAACCATGCTGGAGCTCATCAATCAGCTGGATGGCTTTGAT
CCTCGCGGCAACATCAAGGTGCTCATGGCCACTAACCGCCCTGACACTCTGGACCCAGCGCTCATGAGAC
CGGGGAGGCTGGACAGGAAGATTGAGTTCAGCTTACCTGACTTAGAGGGTCGAACGCACATCTTTAAGAT
TCATGCTCGCTCAATGAGTGTGGAAAGAGACATTCGATTTGAGCTGTTGGCCCGCCTGTGTCCAAACAGT
ACTGGAGCGGAGATTAGAAGTGTTTGCACAGAAGCTGGTATGTTTGCAATCCGAGCACGGAGAAAAATTG
CTACAGAGAAGGACTTCTTAGAAGCTGTAAATAAGGTCATCAAGTCTTACGCCAAATTCAGCGCTACTCC
CCGCTACATGACATACAATTGAGCCCCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTT
GCCACCGCACAAAAATAAAAGATTTAAAAACTGAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3590739 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3590739 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:19439 same embryo
 EMAGE:19435 same embryo
 EMAGE:19436 same embryo
 EMAGE:19437 same embryo
 EMAGE:19434 same embryo
 EurExpress:euxassay_004830 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS