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EMAGE:19583

Zc3h10 zinc finger CCCH type containing 10 ( MGI:2143670)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:19583
euxassay_005093_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:19583Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
19583_wholemount_weak.wlz
19583_wholemount_possible.wlz
19583_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:19583_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7522
Entity Detected:Zc3h10, zinc finger CCCH type containing 10 ( MGI:2143670)
Sequence:sense strand is shown

>T7522
CGAAGCTAGAGGACCGGCAGGCGGCAGCAGCAACTACGGCGGCGGCGGCAGAACCCAGCAGTGATGTGGA
GGTGGAGACTCACGGGAGCCCCGGACTTCACCTGAGCTACCTCAGTCGCCAAGAGTGGCAAGAAAAGGAA
GAAGACCCTGACTTGGGGGGGACCAGGATGCCTGACCGGGACAGCTATGCCAACGGCACTGGCAGCAGCG
GTGGAGGCCCTGGAGGTGGTGGCAGTGAGGAGGCCAGTGGGGCAGGGACAGGCAGCGGGGGAGCCACCTC
AGATGCCATCTGTAGAGACTTCCTGAGGAACGTCTGCAAACGAGGCAAGCGATGTCGATACCGCCACCCA
GACATGAGTGAGGTATCCAATTTGGGGGTAAGCAAAAATGAATTTATCTTCTGCCATGACTTCCAAAACA
AGGAGTGTAGCCGCCCCAACTGTCGTTTCATCCACGGCTCCAAGGAGGATGAGGATGGCTATAAGAAGAC
AGGAGAGCTGCCTCCCCGGCTGAGGCAGAAAGTGGCCGCTGGGCTGGGTCTCTCACCCGCCGACCTACCC
AATGGTAAGGAGGAGGTCCCCATCTGCCGCGACTTCCTCAAAGGTGACTGTCAGAGAGGAGCCAAGTGCA
AGTTTCGTCACCTGCAAAGGGATTTTGAGTTTGATGCTCGCGGTGGAGGAGGCACTGGAGGTGGAGGCTC
CACAGGCTCTGCTCCCCCAGGACGCCGTCATGATCTCTATGACATCTACGACCTTCCGGAAAGGGGCTTT
GAGGACCACGAACCAGGCCCTAAGCGCCGGAGAGGTGGCTGCTGCCCTCCTGACGGCCCCCATTTCGAGT
CCTACGAATGTAACTTGGCTCCGCTCCGTGGGGTTGAGTGCAGACTGCTGGAGGAGGAGAACGCCCTGCT
CAGGAAACGCGTGGAGGAGCTGAAGAAGCAGGTCAGCAACCTGCTGGCCACCAATGAGGTACTTCTGGAG
CAGAATGCCCAGTTCCGGAATCAGGCCAAGGTGATGACTCTGAGCTCCACTGCCCCCGCGACTGAGCAGA
CCCTGGCCCCCACTGTGGGCACAGTGGCCACTTTTAACCATGGCATCGCCCAGACTCATACCACTCTGAG
CAGCCAGGCTCTACAGCCTCGGCCTGTGTCCCAGCAAGAACTTGTTGCTCCCACAGGGGCACCGGCTGCT
CCCCCGACTAATGCTGCACCTCCTGCCGCTCCGCCGCCCCCACCTCCACACCTGAACCCCGAGATCACGC
CGCTGTCAGCCGCTCTGGCTCAGACCATCGCCCAGGGGATGGCACCCCCACCTGTTTCCATGGCCCCTGT
AGCTGTGTCTGTGGCTCCTGTGGCTCCTGTGGCTGTGTCCATGGCCCAGCCCTTAGCAGGAATCACAATG
AGCCACACCACTACTCCTATGGTGACTTACCCCATTGCTTCCCAGAGCATGCGCATCACAGCCATGCCAC
ACTGACAGGACTAATGGATACTCTACTCCCTGTTACAGCATCCGAGGGCTGGGGTCACGGGGCCCTTCCC
CACTTGCATAGCCCTCCCAGGCTCTGTCCGAAGGGCCACTCAGAAACTAGGACAAGAGACTACAAGGAAT
ATACTTGGTAGGAGCATCTCCTGAGGCAGGGTTGTGCTGGTGTGTTCTCCCCACTCTTGAGAGGGGTCTC
TCCTTCAGGCCTCAACTCAAACAGGCTTGCACAGGAGTGGAGACTTGAGCCGGCAGAGAGAAAGGACTGA
GGGACTGTCTTTTCTCATAGGAAGTTGGGGGTGTCCCTGGTCTTGTTTTCATTGTGAACAGCACAGATTC
CAGCACTGGTGTGGGAGAGAGAAATTCCCCACCCAGACAGAGAGCCAGGAAAGATGGAGAAAGTGAAAGT
CAGTGGTCAGGAGCAAAGACCTCATATGAGCCTTCAGATGGTTCGGGGCCCAAAAACACTCCTGGGCCCC
TGGGAAGGCTGGGACCATAGTACTCAAACCCAGAGTAGGGGAACATTCACTTACCTCGCTTGGCCTGGAA
ATCTGTAGGGCAGTGCCCACTACTTTCCAAAGAAATAAAAGAACGTTATTTTTTAACAAAAAAAAAAAAA
AA
Notes:The probe template was PCR amplified from IMAGE:4239511 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4239511 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:19580 same embryo
 EMAGE:19579 same embryo
 EMAGE:19582 same embryo
 EMAGE:19581 same embryo
 EurExpress:euxassay_005093 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS