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EMAGE:20436

Utp14b UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast) ( MGI:2445092)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:20436 EMAGE:20436 EMAGE:20436 EMAGE:20436 EMAGE:20436
"Pseudo-wholemount" of euxassay_012723. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_012723_01 euxassay_012723_02 euxassay_012723_03 euxassay_012723_04
EMAGE:20436 EMAGE:20436 EMAGE:20436 EMAGE:20436 EMAGE:20436
euxassay_012723_05 euxassay_012723_06 euxassay_012723_07 euxassay_012723_08 euxassay_012723_09
EMAGE:20436 EMAGE:20436 EMAGE:20436 EMAGE:20436 EMAGE:20436
euxassay_012723_10 euxassay_012723_11 euxassay_012723_12 euxassay_012723_13 euxassay_012723_14
EMAGE:20436 EMAGE:20436 EMAGE:20436 EMAGE:20436 EMAGE:20436
euxassay_012723_15 euxassay_012723_16 euxassay_012723_17 euxassay_012723_18 euxassay_012723_19
EMAGE:20436 EMAGE:20436 EMAGE:20436 EMAGE:20436
euxassay_012723_20 euxassay_012723_21 euxassay_012723_22 euxassay_012723_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:20436Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
20436_wholemount_strong.wlz
20436_wholemount_moderate.wlz
20436_wholemount_weak.wlz
20436_wholemount_possible.wlz
20436_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:20436_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T38088
Entity Detected:Utp14b, UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast) ( MGI:2445092)
Sequence:sense strand is shown

>T38088
GGTACTGCTCTTCCACAAGGTCTGACCTCTCTATCCTACAGAGCAGTCAGAAGTGCCTCTCCAGAAAACA
GCAAAAACAACTGAAGAAGTTGAGCTCTGCAGATTGAGCTTCCAGCAGAGTTGCATCTTTATGACCTGGG
GCTAGGAACCTCTAGTGTTTCTCTTGGTTGCATCATTGTGCTTCAGGGTCATTTCCTAAATTGACAAACA
CTGTGTACTTAAGCCACATTGTAGAAATAAGGCATTTTTATCGAATGAAGAGCTTACATTCCATTTTGAG
GTATATGATAAATTTAGAAATGATTCATTTATGGGAAAAATGCAGAGTACCTATATTGGTACCTATCCTG
GGCTTAGAGAGGGATGTGTGGACAGAGAAGTTCAGCCTGGGACTGGGCAGAGGAAGCGTGGGCAGCAAAA
AATGCTCAGTTAGTTTAGATAGTAAGTTAATCGATCCTGATCTAGTAGCTCATATATGTAATCAGCGTTC
TTCGAGGCTGAGAATCAGTTAGTTGAGGCCACAGAATGAGAATTGGCTCAAAAACAAACAAACAAACAAG
CCCAAAAAGATTCTAGGAAGAGTTTATAGGCAGAATGACTTGGAGAAGACAGACAATGAAGATAGAGACG
AGTAAAATTTAAGAATAAAGTGTTATAGTTTGCCATTCCCAGATAGCTTTCCTGAGATTTCCTGGTGCAA
AATGGAGGACTCCCT
Notes:The probe template was received by the EURExpress consortium as an aliquot of PCR product from the Allen Brain Atlas (originally amplified from wild type C57BL/6J mouse whole brain cDNA), and this was re-amplified using the gene-specific Allen Brain Atlas Primer Pair 97114. Forward Primer - name:097114_F_cDNA_Utp14b, sequence:GGTACTGCTCTTCCACAAGGTC; Reverse Primer - name:097114_N_SP6_cDNA_Utp14b, sequence:AGGGAGTCCTCCATTTTGCAC. The reverse primer contains a 5' extension containing an Sp6 RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using Sp6 polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:20435 same embryo
 EMAGE:20437 same embryo
 EMAGE:20439 same embryo
 EMAGE:20434 same embryo
 EMAGE:20438 same embryo
 EurExpress:euxassay_012723 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS