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EMAGE:21136

Prelid1 PRELI domain containing 1 ( MGI:1913744)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:21136 EMAGE:21136 EMAGE:21136 EMAGE:21136 EMAGE:21136
"Pseudo-wholemount" of euxassay_004006. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004006_01 euxassay_004006_02 euxassay_004006_03 euxassay_004006_04
EMAGE:21136 EMAGE:21136 EMAGE:21136 EMAGE:21136 EMAGE:21136
euxassay_004006_05 euxassay_004006_06 euxassay_004006_07 euxassay_004006_08 euxassay_004006_09
EMAGE:21136 EMAGE:21136 EMAGE:21136 EMAGE:21136 EMAGE:21136
euxassay_004006_10 euxassay_004006_11 euxassay_004006_12 euxassay_004006_13 euxassay_004006_14
EMAGE:21136 EMAGE:21136 EMAGE:21136 EMAGE:21136 EMAGE:21136
euxassay_004006_15 euxassay_004006_16 euxassay_004006_17 euxassay_004006_18 euxassay_004006_19
EMAGE:21136 EMAGE:21136 EMAGE:21136 EMAGE:21136 EMAGE:21136
euxassay_004006_20 euxassay_004006_21 euxassay_004006_22 euxassay_004006_23 euxassay_004006_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:21136Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
21136_wholemount_strong.wlz
21136_wholemount_moderate.wlz
21136_wholemount_weak.wlz
21136_wholemount_possible.wlz
21136_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:21136_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5018
Entity Detected:Prelid1, PRELI domain containing 1 ( MGI:1913744)
Sequence:sense strand is shown

>T5018
GCGGTAGGGACCTGGGCGCGGTCCTGCGGAGATTGAGCTGCGAGCCTGGCGGGCGTGCGCCTAGCCACGT
CCCCCCCACCCCCGGGCTCTTCACCCTGATGCTGCACGGGTGCTGAGCCCGTCCGGGTCGGGACGATGGT
GAAGTATTTCCTGGGCCAGAGCGTGCTCCGAAGTTCCTGGGACCAAGTGTTCGCCGCCTTCTGGCAACGG
TACCCGAATCCCTATAGCAAACATGTCTTAACCGAAGACATAGTGCACCGGGAGGTGACCCCCGACCAGA
AGCTACTGTCCCGGAGACTCCTGACCAAGACCAACAGGATGCCACGTTGGGCAGAGCGACTGTTTCCTGC
CAACGTTGCTCACTCCGTGTACATCCTGGAGGACTCTATTGTGGACCCCCAGAATCAGACCATGACCACC
TTCACCTGGAACATCAACCATGCCCGGCTGATGGTGGTGGAGGAACGATGTGTTTACTGTGTGAACTCTG
ACAATAGCGGCTGGACCGAAATCCGTCGGGAAGCCTGGGTCTCCTCTAGCTTATTTGGCGTCTCCAGAGC
TGTCCAGGAATTTGGTCTTGCCCGGTTCAAAAGCAATGTGACCAAGACAATGAAGGGCTTTGAATACATC
CTGGCCAAGCTACAAGGTGAGGCCCCTTCCAAAACCCTTGTTGAGACAGCCAAAGAGGCCAAAGAGAAAG
CAAAGGAGACCGCACTGGCAGCTACAGAGAAGGCCAAGGACCTGGCCAACAAGGCCGCCACCAAGCAGCA
GCAGCGGCAGCTCGTATAACTCGCTTCCTCTCCCTCTCCCCAGTGTACGTGATTATTAAAGAGCAACCTG
CAGCCCTCTCTGCTGTCTGGGGTGGTGGGTCAGGGCCCTGTCCTGGTCAGCATCTGCACCACACCCAGCT
CTGTCTGCCGGGCAGAGGGGTGCAGTGACTTGCCCAAGGTCACAGCAGTGCGCAGGTGATAGACTGTACG
CTCCAAGAGGGCAGGGCTCCTTGTTTTATTCTCTGCTGTGTCCCAAGTACCCTGAACAATATTTAGCACA
TAACAGGCACTCAATAAACACATGATTTGATTAGCCCCAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5251367 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5251367 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_004006 same experiment
 EMAGE:21137 same embryo
 EMAGE:21138 same embryo
 EMAGE:21139 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS