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EMAGE:21255

Dtd1 D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae) ( MGI:1913294)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:21255 EMAGE:21255 EMAGE:21255 EMAGE:21255 EMAGE:21255
"Pseudo-wholemount" of euxassay_002122. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_002122_01 euxassay_002122_02 euxassay_002122_03 euxassay_002122_04
EMAGE:21255 EMAGE:21255 EMAGE:21255 EMAGE:21255 EMAGE:21255
euxassay_002122_05 euxassay_002122_06 euxassay_002122_07 euxassay_002122_08 euxassay_002122_09
EMAGE:21255 EMAGE:21255 EMAGE:21255 EMAGE:21255 EMAGE:21255
euxassay_002122_10 euxassay_002122_11 euxassay_002122_12 euxassay_002122_13 euxassay_002122_14
EMAGE:21255 EMAGE:21255 EMAGE:21255 EMAGE:21255 EMAGE:21255
euxassay_002122_15 euxassay_002122_16 euxassay_002122_17 euxassay_002122_18 euxassay_002122_19
EMAGE:21255 EMAGE:21255 EMAGE:21255
euxassay_002122_20 euxassay_002122_21 euxassay_002122_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:21255Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
21255_wholemount_strong.wlz
21255_wholemount_moderate.wlz
21255_wholemount_weak.wlz
21255_wholemount_possible.wlz
21255_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:21255_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4640
Entity Detected:Dtd1, D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae) ( MGI:1913294)
Sequence:sense strand is shown

>T4640
GTCGAGGAGCCACCGGCGGAGTCGCAAGGTCTGACCACACAGCAAATTCCAGTCGCTACAGCCGCCGCCA
TGAAGGCCGTGGTGCAGCGCGTCACTCGGGCTAGCGTCACAGTTGGAGGAGAGCAGATAAGCGCCATCGG
ACGGGGCATCTGTGTCTTGCTGGGTATTTCCATGGAAGACTCACAGAAGGAACTGGAACACATGGTTCGA
AAGATTTTAAATCTGCGTGTGTTTGAGGACGAGAGTGGGAAGCACTGGTCCAAGAGCGTGATGGATAAGG
AGTACGAGGTGCTGTGTGTCAGCCAGTTCACCCTCCAGTGCGTCCTCAAGGGGAACAAGCCCGACTTCCA
CCTGGCCATGCCCACAGAGCAGGCAGAGAGCTTCTACAACAGCTTCCTGGAGCAGCTTCGCAAGAGCTAC
AGACCAGAGCTTATCAGAGATGGCAAGTTTGGTGCCTACATGCAGGTGCACATTCAGAACGATGGGCCTG
TGACTATAGAGCTGGAGTCCCCTGCTCCTGGAGCTGCTAGCTCTGACCCAAAGCAGCTGTCAAAGCTGGA
GAAACAGCAGCAGAGAAAAGAAAAGACCAGAGCCAAAGGCCCTTCTGAGTCAAGCAAAGAACGGAATGCA
CCCCGCAAAGAAGACCGCAGCGCCAGCAGCGGGGCAGAGGGTGACGTGTCTTCTGAGCGGGAGCCATAGA
TGCGGATGCAGGAGCTCAGCAAATTACCATTGGGCAGAATCGGATCCTGAAAAATCAAGATGCTAAAGCC
CCTACACTGCTTTAAGAATTCGGGACTCAAATATGAAAAGAAAATCAGAAATAAGACCCTGGGAACCTGA
ATATCCCTGCAGAAAAACACCAAAGGACCATTTTATTTTGTGTATTGCTGTGGTCTGATTGGGGTAGTGG
GTGCTGTGGGATGGGAGAGTGCTTGTGGGTTCACACCCATGCCCTCCCCATGGAGAGGGGGCCATTGGTT
TTCTTGCTTTCTACCATGTCTTGGCTTGCTTTTGGAACAGGCTGGCCTAGCATCATCTGTCCTCATCTGT
GGTGTACTGTGAGTCTGTGATCCATCTCCAGCACATGCCTGCTGTCCACCATTTCCATCATTGAGTCACA
AGACAGGGCTGGTGTTAGGCAACCAATAATAACATATTGTATGAGACTTTGCATCTTGTACATTTTCTCT
TCTTTTCTAAAAATAAATAATAAAACCATAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5008303 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5008303 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_002122 same experiment
 EMAGE:21252 same embryo
 EMAGE:21253 same embryo
 EMAGE:21254 same embryo
 EMAGE:21256 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS