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EMAGE:21485

Eif3h eukaryotic translation initiation factor 3, subunit H ( MGI:1915385)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:21485 EMAGE:21485 EMAGE:21485 EMAGE:21485 EMAGE:21485
euxassay_001080_01 euxassay_001080_02 euxassay_001080_03 euxassay_001080_04 euxassay_001080_05
EMAGE:21485 EMAGE:21485 EMAGE:21485 EMAGE:21485 EMAGE:21485
euxassay_001080_06 euxassay_001080_07 euxassay_001080_08 euxassay_001080_09 euxassay_001080_10
EMAGE:21485 EMAGE:21485 EMAGE:21485 EMAGE:21485 EMAGE:21485
euxassay_001080_11 euxassay_001080_12 euxassay_001080_13 euxassay_001080_14 euxassay_001080_15
EMAGE:21485 EMAGE:21485 EMAGE:21485 EMAGE:21485 EMAGE:21485
euxassay_001080_16 euxassay_001080_17 euxassay_001080_18 euxassay_001080_19 euxassay_001080_20
EMAGE:21485 EMAGE:21485 EMAGE:21485 EMAGE:21485
euxassay_001080_21 euxassay_001080_22 euxassay_001080_23 euxassay_001080_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:21485Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
21485_wholemount_strong.wlz
21485_wholemount_moderate.wlz
21485_wholemount_weak.wlz
21485_wholemount_possible.wlz
21485_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:21485_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
axial skeleton
weak weak
regionalweak expression: see section 2 3 4
Annotation Validation: spatial mapping by EMAGE editor, text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4268
Entity Detected:Eif3h, eukaryotic translation initiation factor 3, subunit H ( MGI:1915385)
Sequence:sense strand is shown

>T4268
AAACATGGCGTCGCGCAAGGAAGGCACCGGCTCTACCGCCACCTCCTCCGGTTCTGCTGGCGGCGCGGTG
GGGAAGGGCAAAGGCAAAGGCGGCTCCGGAGATTCGGCCGTGAAGCAGGTGCAGATCGACGGCCTGGTAG
TATTAAAGATAATCAAACATTATCAAGAAGAAGGACAAGGCACTGAGGTTGTTCAGGGCGTGCTCCTGGG
TCTGGTTGTGGAAGACCGGCTAGAGATTACCAACTGCTTCCCGTTCCCCCAGCACACGGAGGATGATGCT
GACTTTGATGAGGTACAGTATCAGATGGAGATGATGCGCAGCCTTCGCCATGTCAACATTGATCACCTCC
ACGTGGGCTGGTATCAGTCCACATATTACGGCTCCTTCGTTACCCGGGCGCTTCTGGATTCTCAGTTCAG
CTACCAGCACGCCATTGAAGAGTCTGTCGTCCTCATTTATGATCCCATAAAAACTGCCCAAGGATCTCTC
TCGCTGAAGGCGTACAGACTGACTCCTAAACTGATGGAAGTTTGTAAAGAGAAGGACTTTTCCCCTGAAG
CATTGAAAAAGGCAAGCATCACCTTTGAGCACATGTTTGAAGAAGTGCCGATTGTAATTAAAAACTCACA
TCTGATCAATGTCCTTATGTGGGAACTTGAGAAGAAGTCAGCTGTGGCGGATAAGCACGAATTGCTCAGT
CTTGCTAGCAGCAATCATCTGGGGAAGAGCCTCCAGCTGCTGATGGACCGGGTGGACGAAATGAGCCAGG
ACATAATCAAATACAACACGTACATGCGCAACACCAGTAAGCAGCAGCAGCAGAAACATCAGTATCAGCA
GCGTCGCCAACAGGAGAATATGCAGCGACAGAGTCGAGGCGAGCCCCCACTCCCTGAGGAGGACCTCTCT
AAACTCTTCAAGCCCCACCAGGCCCCTGCCAGGATGGATTCACTGCTCATTGCAGGCCAGATTAACACTT
ACTGCCAGAACATCAAGGAGTTCACTGCCCAAAACTTAGGCAAACTCTTCATGGCCCAGGCTCTTCAAGA
ATACAATAATTAAGAAAAGGAGCCTCCTGAGAAGGCGTTGAGTAGACAGACTGTTGAGAGGCCACAGAGT
GCACTTGGAAAAACTCATTTCTGTGCTGCAAAGCAATGGTGGGGAGGCGCAGTGCCGCGACTGCTGTAGT
GGTTTCTAGCCAATAATAAAACTTTAATTGGTTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4504013 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4504013 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_001080 same experiment
 EMAGE:21483 same embryo
 EMAGE:21484 same embryo
 EMAGE:21480 same embryo
 EMAGE:21482 same embryo
 EMAGE:21481 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS