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EMAGE:29580

2310003C23Rik ( MGI:1923675)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
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View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8888
Entity Detected:2310003C23Rik, ( MGI:1923675)
Sequence:sense strand is shown

>T8888
GGCTCATCAGTGAACTGCACTTTCTTTGGTGCCAGCTGGAACTGTCTAGGTTGTAGGAGTAGGGAGGAAG
GAGGCTTGTGCCATCTTATCAGTTTTCCCACAGAGGAGTTGAAGACTCCACCCTTGACTAACACTTGACT
TCCTTTTGATTGCTGTGTCCTTTTTAACACCCTAACATAATGTCTAGTGTATAACTCTATAGTGATTCCC
CTTAATACTTTTAGCTTCAAACCTAATCCCCTCCTTCATAGTGTGATGTCTTGGTCTCTTCATTCTAGGA
CTTCTGATTCTATTTCACTAACCATACATCCCACCTTTGACCTTGATGCTACCCAGATGTGTAACTGTCT
CAGGCCTTTTTTGCTTGTCCGTTTGAAGATTGAAAGCATCCTCCTACTTTTTGGTTTTTGGAGACAGGGC
TTCTCTGTATAGCTCTGGCTGGCCTCAAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCG
CCTGCCTCTGCCTCCTAAGTACTGAGATTAAAGGCATGTGCCACCACTGTCCGGCCCCTCCTACTCTTAA
ACTTACTATATTGCTGTGTTTACTTTTTGAAATGATTAAATTGGACATAGAATTTTTCCCTAACCATTGT
ATCGTTTTCCTGTAGAAATAAATCATAATGAGTTATGCAGAAAAGCCGGATGAAATAACCAAAGATGAAT
GGATGGAAAAGCTCAATAACTTGCATGTTCAACGAGCAGACATGAACCGACTCATCATGAACTACCTAGT
CACAGAGGGCTTTAAGGAAGCAGCAGAGAAATTTCGGATGGAGTCTGGGATCGAACCAAGTGTGGACCTA
GAAACACTTGATGAGCGAATCAAGATTCGGGAGATGATTCTGAAGGGTCAGATCCAGGAGGCCATTGCCT
TGATCAACAGCCTCCACCCAGAGCTCCTAGACACAAACCGGTATCTTTACTTCCACCTTCAGCAACAACA
CTTGATTGAGCTTATCCGTCAGCGTGAGACAGAAGCAGCATTGGAGTTTGCCCAGACACAACTGGCAGAG
CAGGGTGAGGAAAGCCGAGAATGCCTCACAGAGATGGAGCGCACACTGGCCTTGCTGGCCTTCGATAGCC
CTGAGGAGTCGCCTTTTGGAGACCTCCTTCACATGATGCAGAGGCAAAAGGTATGGAGTGAAGTTAACCA
GGCTGTTCTGGATTATGAGAATCGAGAGTCCACACCCAAGCTGGCAAAATTACTGAAACTGCTACTTTGG
GCTCAGAATGAGCTAGACCAGAAGAAAGTAAAATATCCCAAAATGACAGACCTCAGCAAAGGTGTGATTG
AGGAGCCCAAGTAGAGCCTGTGCATGGACCCAGCACTGTCAATAGGCACAGGACTCTCCCTCCTCCGGCT
GTGACTGGCAGATTGTCACCACAGTAGAGAACCTTTCCCCTGTACTTTTCTTTGGCCCCATTGTTTAAAA
GGGGAAAATGGCCTTTTTAAACCCTGTCAAGCCCATGATGGAAGACACCACCTCTGCCATGCCCTGTATC
CCGAGAGCTGCACACACTGCTTCCAGATTGCTGGTTCCAGAAGATGTAATTTGCCACTGTGTGCTGCACG
GCTAGGGAGTGTCATCTCAGCTGAAGGCCTCACCCAAGACAGGCAGACAGACATGAACATTACTGATGTG
CTTTTCCGACCTGCTATGTGCAGGCAGGCAGGGGTTATCTTCCTGGGTCTCACAGACTTTCATGGTTTTC
CTTACCCCTTCTTTTCTTTTTCTTCCTCATTTTGTTCCTTCATAGGAAAAAAATGTATAAATTTGTAAAT
CTTAATTCAAAGATAACTTTTGTGTGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6415235 using vector (pYX-Asc) specific primers. Forward Primer - name:RZ. T3, sequence:ATTAACCCTCACTAAAGGGA; Reverse Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG. Anti-sense probe was then transcribed from the PCR amplified template usi. T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6415235 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_006154 same experiment
 EMAGE:31857 same embryo
 EMAGE:29751 same embryo
 EMAGE:29971 same embryo
 EMAGE:29742 same embryo
 EMAGE:30891 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS