Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:29591

Phactr3 ( MGI:1921439)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:29591 EMAGE:29591 EMAGE:29591 EMAGE:29591 EMAGE:29591
euxassay_006130_01 euxassay_006130_02 euxassay_006130_03 euxassay_006130_04 euxassay_006130_05
EMAGE:29591 EMAGE:29591 EMAGE:29591 EMAGE:29591 EMAGE:29591
euxassay_006130_06 euxassay_006130_07 euxassay_006130_08 euxassay_006130_09 euxassay_006130_10
EMAGE:29591 EMAGE:29591 EMAGE:29591 EMAGE:29591 EMAGE:29591
euxassay_006130_11 euxassay_006130_12 euxassay_006130_13 euxassay_006130_14 euxassay_006130_15
EMAGE:29591 EMAGE:29591 EMAGE:29591 EMAGE:29591 EMAGE:29591
euxassay_006130_16 euxassay_006130_17 euxassay_006130_18 euxassay_006130_19 euxassay_006130_20

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8542
Entity Detected:Phactr3, ( MGI:1921439)
Sequence:sense strand is shown

>T8542
CCCCAGACATTCCTGGACATCTCCCCCAGCCCCAAGCACGCCATAAACACTGACAAGAAAAAGTTTTTAT
TTCCTGGTTCAACTTTTTTTTTTCCCCTGGAATATAAGCAGAAGAATGGGAATAAATACGAATAAATAAC
AAAGCGAGGCCGCGCAAGCCGGGATGCGCCTGGCTGCAGCCTGCAAGGCTTTTGTCTCCCCACCCTGAAG
CCAGCCTGGCGTCCTCCTCCGTTCTTTTTCTTTCCTGGTCCCTTTTGCTTTTCCTTTTAAAAAAGACGCC
CTCTCCAGCCCCCTCGCCGGTGACCTTGGCCGCCTAGGATGCTCTGATTCCGCATCTCCCTCCAACTTGC
CCCTGCGTCGCCTTTCCCATGGCCGCATCCGAGGACGGCAGCAGCTGCCTTGTGTCGCGGGGCCGCTCGC
AGAGTGACCCCAGCTTCCTCAGCGACTCCTCAGCCACCTCCACGGACGCCGGGGAGAACCCAGATGAGAT
GGACCAAACTCCCCCAGCACGCTCAGAGCCTCTGGTCTCAGGGATTCGAACTCCCCCTGTGAGGAGGAAC
AGCAAGCTGGCCACCCTGGGCAGGATCTTCAAACCTTGGAAATGGAGGAAAAAGAAAAACGAGAAACTGA
AGCAGACGACGTCAGCGCTGGAGAAGAAGATGGCTGGCAGGCAAGGCCGGGAGGAACTCATCAAGCAGGG
ACTGCTGGAGATGATGGAGCAAGATTCTGAAAATAAGGCATGCAGTCCCAAGGAAGGCTCCCAACCTGTG
CAGAGTGAGCCGCCCGCTGGCGAGCAGGAGACGCTGACCTCGGAGGGCGCCCAGCCCGGAAGCCCCTCGG
CCAGTGGAACAGATCAGGTGTCCCAGGATGAGCTTCTGTCCTCCGATGCTCATCTGGATGATACAGCCAA
TATACCGTCTGCATCCACTGCGGAAGAAGCAGACGCTGGCAGCCTCCTGCCCACCACTGATGAGCCCTCT
CAAGCCTTAGCTGGGTCTGACTCCCTGGACAGTCCTCCCAGATCCCTGGAGAGATCTGTGAGCCAGCTCC
CCAGCCCTCCACTGCTGCCCACCCCGCCACCCAAGGCCAGCTCTAAAGCCACAAAAAATGTCACAGGACA
AGCTGCGCTCTTCCAAGGCCCCAGCATGAAGAACAATGAGCCGGCTCTCAGAGGACAGCTTGCCACCCCC
ACAGGGTCCCCTCATGTCACCACTGTCCACCGGCCACTGCCCCCCAGCCGCGTGATGGAGGAGCTGCATA
GGGCACTGGCTACAAAGCACCGTCAGGACAGTTTTCAAGGGCGGGAATGCAGAGGGTCTCCAAAGAAGCG
GATGGATGTGCGTCTGTCTAGGACGTCCAGCATGGAGCGGGGCAAGGAGAGGGACGAGGCGTGGAGCTTT
GACGGGGCCTCAGAGAACAAGTGGACGGCTACCAAAGACTCCGAGGAGAACAAGGAGAATCTGATGCTGA
GCTCCGAGCTCAAGGATGACATGCTCCTGTATCAGGACGAGGAGGCGCTCAATGACTCCATCATCTCGGG
AACTTTGCCGAGGAAATGCAAGAAGGAGTTGCTGGCAGTGAAGCTGAGGAACCGGCCGAGCAAGCAGGAG
CTAGAGGACCGGAACATCTTCCCCAGGAGGACCGATGAGGAGAGACAGGAGATCCGACAGCAGATAGAGA
TGAAGCTGTCCAAAAGGCTGAGCCAGAGACCCGCCGTGGAGGAACTGGAGAGAAGAAATATCCTGAAACA
AAGGAATGATCAGACAGAGCAGGAAGAAAGGAGAGAAATCAAGCAAAGATTAACAAGAAAGCTTAACCAG
AGACCCACTGTTGATGAATTGAGAGACAGAAAAATTCTGATCCGTTTCAGTGATTATGTGGAAGTAGCAA
GAGCACAGGACTATGACAGGAGGGCAGACAAGCCCTGGACAAGACTGTCAGCAGCAGATAAGGCAGCAAT
TCGTAAAGAATTAAATGAATATAAAAGTAACGAAATGGAGGTACACGCATCCAGCAAGCACTTGACAAGA
TTCCACAGGCCATAGAGATTTTCTTCTGAGAAGAATTTGTGTTTAATTTTTGATACCAACACTGAACATT
CATCAGGGAACTTTCCTCAAGTCTAACTGCTGTGTTTGTGAGAAGAGCAGAATCACGGAGACGCAATCCT
GACCACTGACTACAAGAGGAGCAACCCAGAGGATACACTCCCCTCTCTGGTGTCTGAGGAGTGTGAACCG
TTGGGGTCACTTTAGGCCCAGAGTAACTCTCCCAGAAGAAAACTTGTTTGCCTTCAACCTTGTTTTCCAG
TTCTGCAGCGTCATGGAGGATGGGCGGGCGCCATGCATGTGCAGGCTCACACTCCCAGCCTCCGCCACGC
CACGAGGGACCTGTGACCCAGTGTCATTCAGTATTTTGTTGAGAAGACATTTTTATCCTAATGATTTGAA
AACTAAGTTCATGTTATAGAGTGGTTTACTGTACTATACTTTCTCTTTTTTATATGATGTCTAACAAAAA
AAAAATACAGCTCCAACATTTTGATTCCTGTTAATTTTGTTCTTTAATTAAATGACTACTTATTACAGGA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5708186 using vector (pYX-Asc) specific primers. Forward Primer - name:RZ. T3, sequence:ATTAACCCTCACTAAAGGGA; Reverse Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG. Anti-sense probe was then transcribed from the PCR amplified template usi. T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5708186 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_006130 same experiment
 EMAGE:29604 same embryo
 EMAGE:31553 same embryo
 EMAGE:31563 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS