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EMAGE:30333

4930569K13Rik ( MGI:1924882)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:30333
euxassay_006679_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8124
Entity Detected:4930569K13Rik, ( MGI:1924882)
Sequence:sense strand is shown

>T8124
TTCCTACGCCCACTTCAGTAGAAGATCTCTGGCCTCCGGAGTTCAGCGGAGACTTCATTGCAGGATCATC
AGTCTCCCTACAGATCTGTGAAGATGAGCTTGCGTGCCACACCCACACTCCTACAGCTCGCAATGCAAAG
CCTGCTGAGGGATGAGGCCTTGGCCATCTCTGCTCTGCAGGACCTGCCCATGGAGCTCCTCCCACCACTC
TCCAAAGATGCCATCACTCACAAACGACTTAACATCCTGAGGAAGATGGTGCAGGTCTGGCCTTTTCCCT
GTCTCCCGCTGGGTGGTCTGATGAAGATGAAGACACCATACCTGGATATCTTGCAAACCGTACTGGATGG
GGTTGATGCACTGCTTGACCAGAATACTCACCCCAGGAATTACAAACTGCAAGTTCTGGATTTGCGGGCT
TTGCACAAGGACTTCTGGACCGTATGGGCTGGAGATACGACAACATCTTGCGCTCCAGGGGTCAAGTGTA
GGAGAAAAATACAAAAGAGAGGTCCAAAGATAGAAGCCAAGCAAAACTCATTGAAAGTGTTTATAGACCT
GTACCTCAAACCAAGAGCCTTGGATACATGCCTGTCCTATGTCTTCCTGTGGGCGAGAGAGAGAAAAGCT
TTGTTGCAGCTTGGCTGTAAGAAGCTGAAGATCAACACAGTAGCTATCCAGAATATTGTGAAGATTCTGG
AAATGCTAGACCTGGACTATGTGGAGGAAGTAGAAGTATGTTGTACCTGGAAGCTGTCTACTCTGGCCAT
CTTTGCTCCTTACCTGGGCCAAATGAAAAATCTTCTCTCGATCATTCTCTCTCACATTCATGTGCCTGCC
TCTATTACCCCAGAGGAGGAGAAGCAGCTGGTCAGCCAGTTCACCTCTCAGTTTTCCAACCTGCAGTACC
TCCAGGACCTCTCCCTGGACTCCATCGACTTCCTCAAAGGTCAAATGGACCAGTTGTTCAGGTGCCTGGA
GGTCCCCTTGGAGATCCTCTCTATTACTGATTCCAAGATTTCAGAATCAGACTTACAGTCCCTGTCCCAG
CGTCCAGGCATCCGACAGCTCAAACACCTGAACCTGAGTGGTGTCATTCTGACCGACATAAGTCCTGAGC
CTCTTCGAGTCCTGCTGGAGAGAGTTGCAGCCACCCTGAAGACCCTGGACTTGGAGAACTGTATGATTAT
GGACTCCCAGCTTGATGTCCTCTTGCCTGCCCTGAGCCAATGTGCTCAGCTTATCATGTTCAACTACTTA
AGGAACCCCATCTCAGTGTCTATTCTGGAGCGCCTGCTCCACCACACCTCCGGGCTGAACTATTTAAGCT
TGGAGATGTATTCTACCCCTTGGGAGATTTATGGTGCCCAGGGTGCTTCCTACCATAAGAGGCTAGAACA
GCTTAGAGAGGAGCTGAGCAAGGCGATGCAGCATCTAGAACACAACAGAACGGTCTGGTTCAGCGTCGCG
CCCTGTCTTCCTTGAGGCAACCAGGCCATACGAGTCAGAGCCCAAGCTTCATCAGGCAGGGCTGTTCCCC
TAACTGAGTACTTATATGGCAAGTGATTCCTTCTAGCTCTTGGGAACAGAATCCTCTGGTGTAGATGAAT
CCTTTAGAAAATATCAGGGTGGGGGGTAGGGTGGGGATGGGGGATTGGTTGAGCAGCCGAGGCAACCTCC
CAAATGTTGACCTAAAGAGTTGATGTCCCTTGGGACATGTGTATTTAGCAGTGAGAGATGAAGTTTCTAG
ATGGAGAAACCCTTGAGGGTGTTTACTTCATGGGTGGAGGGAAAGAAGTTGCCAGTGTGTTCTTCCCCAC
TTCGGGCTATAGGGTAAATGGAATAAACCATGTTACAGCTTGGCAGGCCCAAGTAGCCACTGGCAGTCAC
CACCTTAATCTCCAGCTCTGAGCCCTAGAGACTTTGCTCACCAGCAGTCCCATCTATCCAAGAAGGCTAC
AGTTCTGCTCAGAGGGCCGTGTCAGTGTAGATTCTAAACAATCTCACTGAGAGGAATGCAAAGAGAGATG
GTGCTGTTAGGTGCTGAGGACCACCACAAACAGTGAGAAGGGATAGGCTTAAACTCATAAGTAGCCAACA
ACTAACCATACATCATGCTTGAAAATCAGTAAAGCTGACACATAGTAAAGGGATGTATTTGTTAGTCCTA
AGGTACCTAAGTTACAGCTGACCACCAAGAACAGATGTATCTATCACCTGACCTTTGTTTGGTCTACAGA
TGATTGGCCCTATTGCACTGTGGGTGGGCGGCTTTATTAGTAATACGCTACTGGGGATTAAATGTAGGAC
TTTGTGCACGCTAGGCAAATGTTCTACCACTATGAATCTTTAAATCATTACACTGCTGTGTATGTAGGGG
AATTTTCAGTGTTCAAATAAACATGTGGAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:30474135 using vector (pSPORT1) specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template usi. T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:30474135 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_006679 same experiment
 EMAGE:29617 same embryo
 EMAGE:31592 same embryo
 EMAGE:31635 same embryo
 EMAGE:29601 same embryo
 EMAGE:31588 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS