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EMAGE:31244

Hspa12b ( MGI:1919880)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31244 EMAGE:31244 EMAGE:31244 EMAGE:31244 EMAGE:31244
euxassay_003766_01 euxassay_003766_02 euxassay_003766_03 euxassay_003766_04 euxassay_003766_05
EMAGE:31244 EMAGE:31244 EMAGE:31244 EMAGE:31244 EMAGE:31244
euxassay_003766_06 euxassay_003766_07 euxassay_003766_08 euxassay_003766_09 euxassay_003766_10
EMAGE:31244 EMAGE:31244 EMAGE:31244 EMAGE:31244 EMAGE:31244
euxassay_003766_11 euxassay_003766_12 euxassay_003766_13 euxassay_003766_14 euxassay_003766_15
EMAGE:31244 EMAGE:31244
euxassay_003766_16 euxassay_003766_17

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
medulla oblongata basal plate mantle layer
moderate moderate
regionalmoderate expression: see section 08 11 15 weak expression: see section 09 16
stomach
strong strong
regionalstrong expression: see section 01 02 03 04 05 06 07 08
pons mantle layer
weak weak
regionalweak expression: see section 07 17
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6989
Entity Detected:Hspa12b, ( MGI:1919880)
Sequence:sense strand is shown

>T6989
GAGACGGGCCTGGTGCACGTCGAGGTCCACTGTAGGCTCCGCTGCAGGACTCTGAGCTAGCACCCAGGCG
ACAAGACCCGGAGGAGCTGTCCGAGGGGCGGAGCTACAGAGACTGCAAGGATGCTGACTGTCCCGGAAAT
GGGCCTGCAAGGGCTGTATATCAGCTCTAGCCCAGAGAGGTCCCCGGTGCCCAGCCCTCCCGGCTCCCCG
AGGACCCAGGAAAGCTGTGGTATCGCTCCCCTCACGCCTTCACAGTCTCCAAAGCCAGAGGCCCGAGCTC
TACAGCAGGCTTCCTTCTCTGTGGTTGTGGCCATCGACTTTGGGACCACATCCAGTGGCTATGCCTTCAG
CTTTGCTAGTGACCCTGAGGCCATTCACATGATGAGGAAATGGGAGGGAGGGGACCCAGGCGTGGCCCAC
CAGAAGACCCCCACTTGCCTGCTGCTGACCCCAGAAGGCATCTTTCACAGTTTTGGCTACACTGCCCGTG
ACTACTACCACGACCTAGACCCTGAGGAGGCTCGGGACTGGCTCTACTTTGAGAAGTTTAAGATGAAGAT
TCACAGTGCCACTGATCTCACCTTGAAGACCCAGCTCGAGGCGGTAAATGGGAAGAAGATGCTGGCTCTG
GAAGTGTTTGCCCATGCCCTCCGTTTCTTCAAGGAGCACGCCCTTCAGGAGCTGAGAGAGCAGAGCGAGT
GTATGCTTGAGAAGGGTGCTGTGCGCTGGGTGCTGACAGTACCTGCCATCTGGAAACAACCGGCTAAACA
GTTCATGAGAGAGGCCGCCTACCTGGCTGGCTTGGTGTCTCGAGAGGATGCAGAGAAACTCCTCATTGCC
CTGGAGCCTGAGGCTGCCTCTGTCTACTGTCGGAAACTTCGCCTGCACCAGCTCATGGACCTGAGTAGCC
GGACTGCAGGCCGTGGGCGCCTGGGTGAGCGGAGGTCTATCGACTCCAGCTTTCGACATGCCCGGGAGCA
GCTGCGTAGGTCTCGCCACAGCCGAACTTTCCTGGTGGAGGCCGGTGTGGGAGAGCTGTGGGCAGAGATG
CAAGAAGGAGACCGCTACATGGTGGCCGACTGCGGGGGTGGCACTGTGGACCTGACGGTACACCAGTTGG
AGCAGCCTCACGGGACCCTCAAGGAGCTCTACAAGGCTTCTGGCGGTCCCTATGGAGCAGTAGGCGTGGA
CTTGGCCTTTGAGCAGCTGCTCTGCCGCATATTCGGGGAGGACTTCATTGCCAAATTCAAAAGGCAACGG
CCAGCAGCTTGGGTGGATCTAACCATTGCCTTCGAGGCCCGCAAACGCACGGCAGGCCCGCACCGTGCGG
GGGCGCTCAACATTTCGCTTCCTTTCTCTTTCATTGACTTCTACCGCAAGCAACGAGGGCACAATGTGGA
GACCGCCCTGCGCAGGAGCAGTGTGAACCTCGTGAAGTGGTCCTCACAGGGGATGCTCCGGATGTCCTGT
GAGGCTATGAATGAGCTGTTTCAACCCACGGTCAGTGGGATCATCCAACACATAGAGATGCTGCTGGCTA
AGCCTGAGGTGCAGGGTGTGAAGTTGCTATTCCTGGTGGGCGGCTTTGCGGAGTCGGCGGTGCTGCAGCA
CGCGGTGCAGGAAGCCCTGGGCACTCGTGGCCTGCGCGTTGTGGTCCCGCATGACGTGGGCCTCACCATC
CTCAAGGGAGCAGTGCTCTTCGGCCAGGCACCCGGTGTGGTGCGAGTGCGCCGCTCCCCCCTCACTTATG
GTGTGGGCGTGCTCAATCGTTTTGTGCCTGGCCACCACCCACCCGAGAAATTGCTGGTTCGGGATGGGCG
CCGCTGGTGCACCGATGTCTTTGAGCGCTTCGTAGCAGCAGAGCAGTCGGTGGCCCTAGGAGAGGAGGTA
AGGCGCAGCTACTGTCCTGCGCGCCCGGGCCAGCGGCGTGTGCTCATCAATCTGTACTGCTGCGCTGCGG
AGGATGCGCGCTTCATCACTGACCCTGGTGTGCGCAAGTGTGGTGCACTCAGCCTGGAGCTTGAGCCTGA
AGGCTGCCCGGAAAACACAGGCACATCCCCCAGCCGCCGTGAGATCCGTGCTGCCATGCAGTTTGGCGAT
ACTGAGATTAAGGTCACTGCCGTGGATGTCAGCACCAATCGCTCTGTGCGGGCAGCCATCGACTTTCTTT
CCAACTGAGGGTGCACCCTTCGGTGGGGACACAAGAACGTGCTAGTTTTCACAGCAGCACCCCTTTCTCG
GGGTAAGGACACATGGAGACCCGCTTTAGGGCTGTGCCTTGATCACTGGAACACTAAAAGTCCCCTTACC
CCAAGAGGCGAGGTGGTGTAATAGCTAAGAAGTTTGCTTAGAGGGTGAGCCTGGCTTGGCGAGTGTGTGA
CCACGAAGATAGACTGCAACAGAGGACTAAACACTGACCTGAACTTGAGGTTAGGTGAAGCTGCTGAGGA
GCCACGGGGGTGGGGGTGGGAGTGGGAGGGGGTGCAGAACCGGGACTGAAGGTTAGAGTTGGCTAACTTT
GAGTTCAAGCCACAGGAAGCCCAAGAGAGCAATCTCATGCAGGGGGAGTAGGGAAGGGAGTGTTAGGCCC
ATGCTAGAGGGACAGGTGTGAGTAGCACCTTCCTGGAGGTGTGACTGTTAATTGTGGCTGCACTGCCACA
GTGAAAGCAGTTTGGAGATGTGGACACAGCATGCTCAAAGGACCTACAGGAAAGCTATAAATGACTCATT
TGCCCCCAACCCAGTCACAGGAGGACAGAGTTACTGTGGCAAGGGGGTGGGGGTTTCCAGCTCTGCCACA
TATCAGTATACCATTAGGAAATCTGACCAATCAGTTTCTCCAAGTGTGAAATGTCAGACATTTCCTGCCA
ACCATGGCGTAAGACAGCTTTCCCTGCCTGAGAACTTATCCTAAGGTGAAAATAAAGTTTGCAAGGTAAG
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3990088 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3990088 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_003766 same experiment
 EMAGE:29439 same embryo
 EMAGE:31886 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS