Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:31932

Rnh1 ( MGI:1195456)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31932 EMAGE:31932 EMAGE:31932 EMAGE:31932 EMAGE:31932
euxassay_004536_01 euxassay_004536_02 euxassay_004536_03 euxassay_004536_04 euxassay_004536_05
EMAGE:31932 EMAGE:31932 EMAGE:31932 EMAGE:31932 EMAGE:31932
euxassay_004536_06 euxassay_004536_07 euxassay_004536_08 euxassay_004536_09 euxassay_004536_10
EMAGE:31932 EMAGE:31932 EMAGE:31932 EMAGE:31932 EMAGE:31932
euxassay_004536_11 euxassay_004536_12 euxassay_004536_13 euxassay_004536_14 euxassay_004536_15
EMAGE:31932 EMAGE:31932 EMAGE:31932 EMAGE:31932 EMAGE:31932
euxassay_004536_16 euxassay_004536_17 euxassay_004536_18 euxassay_004536_19 euxassay_004536_20
EMAGE:31932 EMAGE:31932
euxassay_004536_21 euxassay_004536_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
pancreas
weak weak
single cellweak expression: see section 04 05 06 07 08 10 11
bladder
weak weak
regionalweak expression: see section 08 09 10 11
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5774
Entity Detected:Rnh1, ( MGI:1195456)
Sequence:sense strand is shown

>T5774
CGGACGCGTGGGTCTGCAGCGGCACCAGGTGAGCAAGGGCCATGTTCCGGGGCGCCCGGCTGCCTTTGAG
AGTTTTTTTCGGGTCCCTTCCTGGCCCTCTTAATACGTGGCAGAGCGGCTGGACCAGAAGACTGCACTGT
GCACCCACCATGAGTCTTGACATCCAGTGTGAGCAGCTGAGTGATGCCCGGTGGACAGAGCTCCTTCCTC
TGATCCAGCAATACGAAGTGGTCAGGCTGGATGACTGTGGCCTCACTGAAGTGCGGTGCAAAGACATCAG
CTCAGCAGTCCAAGCCAACCCTGCCCTGACAGAGCTCAGCCTTCGCACCAATGAACTGGGTGATGGCGGT
GTGGGTCTGGTGCTCCAGGGCCTGCAGAATCCCACTTGTAAGATCCAGAAGCTGAGCCTTCAGAACTGCG
GCTTGACGGAGGCTGGCTGTGGGATCCTGCCTGGCATGCTGCGCTCTTTGTCTACCCTGCGTGAGCTACA
TCTCAATGATAACCCTATGGGGGACGCAGGCCTGAAGCTGCTCTGTGAAGGACTTCAGGACCCCCAGTGC
CGTCTTGAGAAGCTTCAGTTGGAATACTGTAACCTCACAGCTACCAGCTGCGAGCCCCTGGCTTCAGTGC
TCAGGGTGAAAGCTGACTTTAAGGAGCTAGTATTGAGCAACAACGACCTCCATGAACCTGGTGTCCGTAT
TCTGTGCCAGGGCCTGAAGGACTCTGCCTGTCAACTGGAGTCACTCAAGCTGGAGAACTGTGGTATCACA
GCAGCCAACTGCAAGGATCTGTGCGATGTTGTGGCCTCCAAAGCTTCGCTACAGGAACTGGACTTGAGCA
GCAACAAGCTAGGTAATGCAGGCATTGCAGCACTGTGCCCAGGACTGCTGCTTCCCAGCTGTAAGCTCAG
GACTCTGTGGCTCTGGGAATGTGATATCACTGCAGAGGGCTGCAAGGACCTGTGCCGTGTCCTCAGAGCC
AAGCAGAGCCTGAAGGAACTCAGCCTTGCTTCCAATGAGCTGAAGGATGAGGGTGCCCGGCTGCTGTGTG
AGAGCCTATTAGAGCCTGGCTGTCAGCTGGAGTCACTGTGGATAAAGACCTGTAGCCTCACAGCTGCCTC
CTGTCCCTACTTCTGCTCCGTGTTGACCAAAAGCCGTTCTCTGTTGGAGCTGCAAATGAGCAGCAACCCA
CTGGGAGACGAGGGAGTCCAGGAGCTTTGCAAGGCCCTGAGCCAGCCAGATACAGTGCTGCGTGAGCTTT
GGTTGGGAGACTGTGATGTGACAAATAGTGGTTGCAGCAGCCTTGCCAATGTCCTGCTGGCCAACCGCAG
CCTGAGGGAACTGGACCTCAGTAACAACTGCATGGGGGGCCCAGGTGTCCTGCAACTGCTGGAGAGCCTC
AAACAGCCCAGCTGCACCCTTCAGCAGCTCGTCCTGTATGACATTTACTGGACAAATGAGGTGGAAGAAC
AGCTTCGGGCCCTGGAGGAGGAAAGGCCTTCCCTGAGGATCATTTCCTGATGTTCCTCTGGACACATCAA
TCCAGCCCCAGGGGCAGCCAGCAGGATCTCTGGCTCTGGGTGTCCTTGTGTTGACCGGCAATAAGCACTG
TGGTCTTACTTCAGTAGAAAACTTTAAGACACTTTATAACTATTAAAACACTTTGATGGCAAAAAAAAAA
AAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:2654341 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:2654341 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_004536 same experiment
 EMAGE:31937 same embryo
 EMAGE:30645 same embryo
 EMAGE:30643 same embryo
 EMAGE:31930 same embryo
 EMAGE:30631 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS