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EMAGE:7084

Slc26a8 solute carrier family 26, member 8 ( MGI:2385046)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7084 EMAGE:7084 EMAGE:7084 EMAGE:7084 EMAGE:7084
"Pseudo-wholemount" of euxassay_002632. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_002632_01 euxassay_002632_02 euxassay_002632_03 euxassay_002632_04
EMAGE:7084 EMAGE:7084 EMAGE:7084 EMAGE:7084 EMAGE:7084
euxassay_002632_05 euxassay_002632_06 euxassay_002632_07 euxassay_002632_08 euxassay_002632_09
EMAGE:7084 EMAGE:7084 EMAGE:7084 EMAGE:7084 EMAGE:7084
euxassay_002632_10 euxassay_002632_11 euxassay_002632_12 euxassay_002632_13 euxassay_002632_14
EMAGE:7084 EMAGE:7084 EMAGE:7084 EMAGE:7084 EMAGE:7084
euxassay_002632_15 euxassay_002632_16 euxassay_002632_17 euxassay_002632_18 euxassay_002632_19
EMAGE:7084 EMAGE:7084 EMAGE:7084 EMAGE:7084
euxassay_002632_20 euxassay_002632_21 euxassay_002632_22 euxassay_002632_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7084Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7084_wholemount_strong.wlz
7084_wholemount_moderate.wlz
7084_wholemount_weak.wlz
7084_wholemount_possible.wlz
7084_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7084_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5279
Entity Detected:Slc26a8, solute carrier family 26, member 8 ( MGI:2385046)
Sequence:sense strand is shown

>T5279
CATCCACCCATGCCTACACCGAGCAGGAGAAAGGGGAAATCTTATTCTCGTGGCTATTTCTAGAAGATCC
GGGTATGTGGAGGGCAGCAGGGACCCCTTCTCCTCGGCCCAGATGCCATCCTCGCCCGTCACCCGCACAG
CCGGAACGCCCGCGGGTTCTGCAGCAACGGCTCCGGAACTGCCGGCCTCCGCGTCCGCAGCGCTGCCGCC
AGCCAGGCTGGAGCCGAGTCTGTCCCCAGCGTCTGCGCTCCTGCGGGCCACCGGAAACCAGCTAATCCAG
GAACAATGCAAACAGAGAGGAGCCTCCAGAGTTTCAGCAACAGATACACACAAATCCCTTTTGTGTACGA
TGTTAAGCGGAGCGTGTACAACGAGGAGAATTTCCAGCAGGAGCACAGGAAGAAGGGCCCCACCTCTGGG
AACGTGGACATCGATATCACCACTTTCAAGCACCACGTCCAGTGCGGCTGCTCCTGGCACAAGTTCCTGA
GATGCATGCTCACAGTCTTCCCCTTCCTGGAGTGGATATGTTTGTATCGATTCAAGGACTGGCTTCTTGG
AGACTTACTTGCTGGTTTAAGTGTTGGTCTTGTTCAAGTTCCCCAAGGCCTGATACTTAGTTTACTGACA
AGGCAGCTGATTCCTCCCCTCAACGTCACTTACGCCGCCTTCTGCTCTTCAGTCATTTATGTCATTTTTG
GATCATGTCATCAAATGTCCATCGGCCCCTTCTTCCTTGTGAGTGCTCTGATGATCAATGTCCTGAAGGA
TAGACCCTTCAACAATGGTCACCTGATCTTGGGAACTTTTGTCAAAGATGACTTCTCTGTCCCCACATTC
TACTTGAGCTACAACAGATCCTTAAGTATGGTGGCATCTACAACTTTCCTGACTGGGATTATTCAGCTGT
CAATGGGTATGTTGGGCATGGGCTTCATGGCCACATATCTTCCAGAGGCTGCAACCAGCGCTTATCTAGC
AGCTGTGGCCCTGCACATCATACTGGCCCAGATGACATGCATCTTGGGGATTATGGTCAGTTTCCATGCT
GGGCCCATCTCCTTCATCTACAACATAATTAACTACTGCATAGCTCTCCCCAAAGCGAACTCTACCAGCA
TCCTGCTGTTCATCACCTCTGTGGTGGCTCTGAGAATCAACAAGTGCATCCGCATTACCTTCAACCGCTA
CCCTATCGAGTTCCCCATGGAGCTGCTGCTGATTCTTGGCTTCAGCTTACTTACAAGCAAGATAACCATG
GCCACAGAAAACAGCAAGATGCTGATGAACATGATTCCATACAGCTTCGTGTTCCCTGAGAATCCAGAGT
TCGGCATTCTTAGCAGAGTTGTTTTACAAGCCTTGTCTTTATCTTTTGTGAGCTCCTTTCTGCTTATATC
TCTGGGCAAGAAGATTGCCAACTTCCATAACTACAGAACCAATTCCAACCAGGATTTAATAGCCATCGGT
CTTTGCAACTTGCTCAGCTCCTTTTTCAAATGCTGTGTGTTCACCGGTAGTTTGTCCAGGACGACTATCC
AGGACAAATCTGGAGGAAGACAGCAGTTTGCCTCTCTGGTAGGCGCAGGTGTGATGCTGCTGCTGATGGT
GAAGATGGAAAGCTTCTTCCACAATCTGCCTAACGCTGTGCTGGCTGGGATCATCTTAAGCAATGTGGTG
CCCTACCTTGAAGCCATTTACAACTTACCCAGTTTGTGGAGGCAGGACCAGTACGAATGTGTGAGTACAG
ACGCCTCGAGTGGCTGCAATCTGGGTGTGAGGGGAGCAGAAGCTCACACACACACCCTTCCCCATGGCCA
GTTCCCTGGCCTTGATCCGTGGGGCCAGTGAACTTGCCTACCTGAGAACAGCTTCCCAATAAACCTGCCT
TTATTATAAAATAAATAAATAGTTATACTAACTATTACAAATGTTTGACTATCATTCAGTGAGTTCTGAG
TCCTCATGTCAACCCACCTGCCATCTGACAAGGTAGATAACATTGTCTCTATTTTGTACACGGGGACATT
GATATTGTGAGAAAGAAATAAAGGGAGAGATGATCAAGAATTCATCAGAGAGCCGGGCAGTGGTGGTGCA
AGCCTTTAATCCCAGTACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCCAGGGCAGCCTGGTCTACA
GAGTGAGTTCCAGGACAGCAAGGGCTACACAGAGAAACCCTGTCTTGAAACACCAAAATAAATAAATTAA
AAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5361175 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5361175 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7086 same embryo
 EMAGE:7087 same embryo
 EMAGE:7085 same embryo
 EMAGE:7083 same embryo
 EurExpress:euxassay_002632 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS