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EMAGE:7327

Slc25a29 solute carrier family 25 (mitochondrial carrier, palmitoylcarnitine transporter), member 29 ( MGI:2444911)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7327
euxassay_004416_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7327Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7327_wholemount_possible.wlz
7327_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7327_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6431
Entity Detected:Slc25a29, solute carrier family 25 (mitochondrial carrier, palmitoylcarnitine transporter), member 29 ( MGI:2444911)
Sequence:sense strand is shown

>T6431
CGACGGCCAACCGCGGGCCGGGCCCGAGGAGTAGTAAGACACAGCCGGCTCGCCGGGCCGGGCCATGGCG
CTCGACTTCCTGGCTGGATGCGCCGGAGGTGTGGCAGGTGTGATCGTGGGACACCCTTTTGACACAGTCA
AGGTGCGGCTGCAAGTTCAGAGCACAGAGAAGCCTCAGTACCGAGGGACGCTGCACTGCTTCCAGTCCAT
CATCAAGCAGGAGAGTGTGCTGGGCCTGTATAAAGGCCTGGGCTCGCCACTAATGGGACTCACCTTCATC
AATGCACTGGTGTTTGGGGTGCAAGGTAACACCCTCCGGGCCCTGGGCCAAGACTCACCACTCAATCAGT
TCCTGGCCGGTGCAGCAGCAGGCGCCATTCAGTGTGTCATCTGCTGCCCCATGGAACTGGCCAAGACGAG
GCTGCAGCTCCAGGCCGTGGGTCCTGCCCGTACCTACAAGGGCTCCCTGGACTGCCTGGTGCAGATTTAC
CGGCACGAGGGCCTGCGCGGCATCAACCGAGGCATGGTGTCCACACTTCTGCGGGAGACGCCAAGCTTTG
GCGTCTACTTCCTCACCTATGATGTAATGACCCGCGCCATGGGCTGCGAGCCAGGTGACCGCCTGCTGGT
GCCTAAGCTGCTGCTGGCGGGTGGCACGTCGGGGATCACATCCTGGCTCTCCACTTATCCCATGGACGTG
GTTAAGTCACGACTGCAAGCCGACGGGCTGCAAGGAACCCCTCGCTACCGCGGCATCGTCGACTGCATGC
GGCAGAGCTACCAGGCCGAGGGCTGGCAAGTCTTCACGCGAGGGCTGGCCTCCACGTTGCTCCGTGCCTT
CCCGGTCAATGCTGCCACCTTTGCCACAGTCACTGTGGTGCTTACATATACCCGGGGCGAGGAGGCTCAG
GTAGACAGTGAGGCAGCTCTGGGCACCTCTCCCACTCCTGCTGGGTCTGCCCTGGCCCAGCCTTCCAGTC
TGTGATGCTTGCCCAGTGCCACTTTGGTGGAACTTGACAACAGAGGGTATGGCTCCTCAGCCAGTCTTCC
TCATTGGCCTGTGATGACAGCTGTCTGTACCCTACTGGCCCCCTATTTCTTAGCCGTAAAATGGGGACTC
CTCCTCAGACATGGTACATTCAGGAAGGTCAAGCCTCGCTAAGTCTGCCCTATGCAGACAGAACTGCCAG
TCAGAATCTTCCAAGCCCAGCACTCCCCGGGGTATCCCCTGAGCCAACTCTTACAGGCTGGCCAAGGAAG
GACCCAGCCGTTCTTCAAATCCTCCATCAACTGAGTCCCGGGAAAATCTCGGTCATTGTTACAGTGAGGG
ACAGTGGGTGGCATGCAACGCTCCCTCTCCGTGTTGCAGAGTCACCCTGCCTCCGTGCCTACCTAGCTTC
TCCGCTGCTGCCCTTGGAGTGTGGAGCAGGGCTGGGACCCTGGCACTAAGTCCGTTGAGGATCACGCCAG
TGTAGGGTCTGGGTGGGAGCAGACAGGCCACCGGCCTCAATGTCTCCACAGGGAAATTGTGTAGCAGCTG
TCGCAAGACAGAGTCTTCTCAGCTCTGAGCCTCGGGCTACCTGTCTGTAAGATGGGCACCTGGCTCAGCT
GATGTCTGACTCGCTTACTGCCAGCCAGGATTCACACTGGTAGGTAGGCAGAGGGCCCAGAGAACGCAGG
AAATGTGGTCTTTCTGGGCACTGTCAGTGCCTGTGCCCGTGAAAGCAGAGGTCTTGGCACCAGCACAGAG
TTGTTGCCAGTTTGGACCTGCCTGGGCGGGGGAAACTGAGCTCTGGCTGGCTCTACTGTCCTCTAAAGGA
ATAAAGTCTTGTTTTCTAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3584570 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3584570 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7328 same embryo
 EMAGE:7331 same embryo
 EMAGE:7326 same embryo
 EMAGE:7330 same embryo
 EMAGE:7329 same embryo
 EurExpress:euxassay_004416 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS