Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:7350

2810025M15Rik RIKEN cDNA 2810025M15 gene ( MGI:1917203)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7350 EMAGE:7350 EMAGE:7350 EMAGE:7350 EMAGE:7350
"Pseudo-wholemount" of euxassay_004452. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004452_01 euxassay_004452_02 euxassay_004452_03 euxassay_004452_04
EMAGE:7350 EMAGE:7350 EMAGE:7350 EMAGE:7350 EMAGE:7350
euxassay_004452_05 euxassay_004452_06 euxassay_004452_07 euxassay_004452_08 euxassay_004452_09
EMAGE:7350 EMAGE:7350 EMAGE:7350 EMAGE:7350 EMAGE:7350
euxassay_004452_10 euxassay_004452_11 euxassay_004452_12 euxassay_004452_13 euxassay_004452_14
EMAGE:7350 EMAGE:7350 EMAGE:7350 EMAGE:7350 EMAGE:7350
euxassay_004452_15 euxassay_004452_16 euxassay_004452_17 euxassay_004452_18 euxassay_004452_19
EMAGE:7350 EMAGE:7350 EMAGE:7350 EMAGE:7350 EMAGE:7350
euxassay_004452_20 euxassay_004452_21 euxassay_004452_22 euxassay_004452_23 euxassay_004452_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7350Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7350_wholemount_strong.wlz
7350_wholemount_moderate.wlz
7350_wholemount_weak.wlz
7350_wholemount_possible.wlz
7350_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7350_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6448
Entity Detected:2810025M15Rik, RIKEN cDNA 2810025M15 gene ( MGI:1917203)
Sequence:sense strand is shown

>T6448
CGGCTCCCGCCGCCGTCGCCTCGGGGGCTCAAAGCGCCGGCTCCCTCAGCCTGAGGGGCGCGCCCCGGCC
CAGCTTCTGTCCGCCTGGCGTCGGCTTGCTCCCGCGGAACGCGCAGGCCGGCCCGCTAACTCTCAGGCCG
CCGCTCCGGCCGCTGCTTGGGCTCCTCCGGCTCGCGCTCCTCTGAGAAACCCACAAGCCCGGCAGCCGCG
GCGCTGGCGGCGGCGGCAGGCGGCATCCCAGGGTGATAGGCCGAAGCAATCGAGTGCCGAGCTCACGGCC
GCGTGTGCAATCCAGTAACCGAGCGGAGGAGGAACTGCCGCCGAAGACAGCAAAAATCGGGCACCGAAAT
ACTCAGCGGGCCAGGCCCGCCTACTTTCCTAAGACTATCCTGCTCCGACCGCCTCTCGGTGCGGGGATCC
TCGAGCTGCTGGTGGAAGCAGAGACGGTGTTGGGGAGGCGGAGAGAAAACGGGGTGCGGGAAATTTAAAA
AGATGGGAAAGGCGCTTCCCTTTTATCTTAGCCCCTATCCTGTTGATTTCTGGACCAATGCTTCTTTCTC
GGACGAAGAACATGAAGACGCTGCTTTATCTAACAGTCACCTCGGAAGAAACGCCATGGTTCCTCCACAA
GGGAGATCTGGCCCCGCGTCTTGGATCCTGAGATCTGTGCGAGATCCCGGCTTTGCGCCCTGTCCGCCCT
GGAGCTGGATTTATCATCAGTTTAGAATAGCATGGCTACGATGTGTGGTGCGGATGGATGGACGAGCCCC
GCAAGTGCAGACAGGACAGTCCACATCACCTGCCAAAGCAGCCAGCAATGCAACAGCTCTCCAAGATCAG
GCCTAGGTGGATCACTGACCTGGCTAAAAGTACCAAGAAGGCCTGGATCATTGTGGTGCCTCTCTCCAGA
AAATGGTGACAAAAATTGAAATCAACCAGCACATCAGGATCCTCTGTGGCAAGACCAAGATAATAATGGG
GGACACTGTCATCTGGCACTGTGGTTCCTTCACGACAACAGTGGCTGGTGGGTCCTAGATTTACAACATC
ACTTCTGCTGTCACAGTCAAACCGGCCATCAGGAGACTGAAGGAAATTAAAGACCAGTAGAAGTGCTACT
GTTTGAGCAGCCCTGGCCTGCAATAAATGAGTTCATTCCTATGAAAGGTTGTAATAAAGTGTTGGTTGAG
TAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3585495 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3585495 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7352 same embryo
 EMAGE:7349 same embryo
 EMAGE:7347 same embryo
 EMAGE:7351 same embryo
 EMAGE:7348 same embryo
 EurExpress:euxassay_004452 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS