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EMAGE:8200

Tomm40 translocase of outer mitochondrial membrane 40 homolog (yeast) ( MGI:1858259)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:8200 EMAGE:8200 EMAGE:8200 EMAGE:8200 EMAGE:8200
"Pseudo-wholemount" of euxassay_007449. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_007449_01 euxassay_007449_02 euxassay_007449_03 euxassay_007449_04
EMAGE:8200 EMAGE:8200 EMAGE:8200 EMAGE:8200 EMAGE:8200
euxassay_007449_05 euxassay_007449_06 euxassay_007449_07 euxassay_007449_08 euxassay_007449_09
EMAGE:8200 EMAGE:8200 EMAGE:8200 EMAGE:8200 EMAGE:8200
euxassay_007449_10 euxassay_007449_11 euxassay_007449_12 euxassay_007449_13 euxassay_007449_14
EMAGE:8200 EMAGE:8200 EMAGE:8200 EMAGE:8200 EMAGE:8200
euxassay_007449_15 euxassay_007449_16 euxassay_007449_17 euxassay_007449_18 euxassay_007449_19
EMAGE:8200 EMAGE:8200 EMAGE:8200
euxassay_007449_20 euxassay_007449_21 euxassay_007449_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:8200Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
8200_wholemount_strong.wlz
8200_wholemount_moderate.wlz
8200_wholemount_weak.wlz
8200_wholemount_possible.wlz
8200_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:8200_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8350
Entity Detected:Tomm40, translocase of outer mitochondrial membrane 40 homolog (yeast) ( MGI:1858259)
Sequence:sense strand is shown

>T8350
TTTTTTTTTTTCCTATTTTTTTTTCCACGTATATTTTTTGTTTTTTAAGTTTTTTTTTTCTGTAAAATGT
CCCGGTTTTCCATAACTTATAAACATGATTTCTATGGAGGGGTGGAGGGGGAAGTGACAGGCGGCTCGGC
GCTCCTCTGCTGCCCTCAGGAGGACATCAAGTCTTTCCTTTCTGAGCCTGTGTACAGCCGCCTCTGCGCC
TCTGCCTGGGCGCTCACAATCGAATGCCCTTCAGATCCCAGGACTCCCTCCGGGACCCCAGGCCCCCTGG
GCACTGTCCCCTGGCGCTGGGGATCCTTGGGCATGGGAGGTCCCCTCCTTCCCACTGCCCCAACCCCAAG
AGAGAGGGAGAGGAGGGGAGGGCAGCCGGCCCAGCGATGGTCTGCAGAGGAAGGACAGGAGGGCTCAGCC
GATGGTGAGGCCGAAGCCACACAGGAACTTATTCTTGCGGTGGTTCAGGAAGGCGCAGAGGGACAGTGTC
AGGGGCAAGGGCGGAAGCTTCTTCTCCAGCGTGGCGCCCACGATCCAGTTACTGTTCACAGAGCCTTTAA
AAAGGAAGTTGGCCTTGGGCAGGTCCAGCTGATACCCAAAGGAGGCACTGGTGTCCTGCATCCTGGTGCT
GGCCTCAAACTCCACACCCACCTGCAGCTGGTCACTGGCTTTGTGGTAATACGTCGCATGCATGCCTGCC
TGGCCCAGCGTTACTGTAGCCAACCAGTTGTTCAGTGTGTATTTCCCAGCTAGAGACATGACAGTGCCCT
CCTCTCCTGGCCGCCGGTGGTAGACGAGCTCTCCACCCAGGGCCAGACACGGTGTGATGCTCTGGAGGTA
GTGGGCCACGAGGATTCCTGAACCCACCAAGACATCTGGGTTGCCCAGGGTGACAGCAGCTGTGAAGTCA
GAACCACGGTACTCGCCATCCACCTGCCAGTTCACGAACTTGGACTGCTGGGTCTGGATGGCCATTTTGG
ACCTGAGGCCTGGGCTCAGCTGGTGGATGACCTGTGCATTGAGGCTGCCACTATTGTCCATGTCACCCAC
CAGCACGGGGAACGCCTCTGTGGGACTCAGCTGCTTCGTCCCCACGTATGTGACCCCAAAGTGGTAGTTG
GACTCCCCAATTGTGCCGAGGGCTACTGTGTGGGTCACCTGGAAACGGTTGCTCAACCCTTTGTTGACTG
TAAGTTTGACACCTTCCATCTGAACTGGAAACAGCTCCTTGCACTTCCGGTGGCACTCCTCGAACGTCCC
CGGGTTGGGCAGGCATCCGCAGCTCCCATCTTCCGAGGCCGCCGCAGCGCCGCTGGCCGCAGCCCCGGGA
GTCCGTTCCGAACCACGGCCAGTGCTTGACCCAGTGCCCAGGCCGCCGCCGAGCGGCGGCAGAGTGAAGC
CTGGCGGCGAAGGAGGCGGCGGCGGGAGCCCCACGAGGGACGGCGTAGGAGGCGGCGGTGGCCCTGCGGG
CGGAGAGCTGGCAGCCAACACGTTCCCCATGGTATG
Notes:The probe template was PCR amplified from IMAGE:3326417 using vector (pT7T3D-PacI) specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3326417 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:8203 same embryo
 EMAGE:8201 same embryo
 EMAGE:8199 same embryo
 EMAGE:8202 same embryo
 EurExpress:euxassay_007449 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS