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EMAGE:11321

Zfp219 zinc finger protein 219 ( MGI:1917140)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:11321 EMAGE:11321 EMAGE:11321 EMAGE:11321 EMAGE:11321
"Pseudo-wholemount" of euxassay_006592. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_006592_01 euxassay_006592_02 euxassay_006592_03 euxassay_006592_04
EMAGE:11321 EMAGE:11321 EMAGE:11321 EMAGE:11321 EMAGE:11321
euxassay_006592_05 euxassay_006592_06 euxassay_006592_07 euxassay_006592_08 euxassay_006592_09
EMAGE:11321 EMAGE:11321 EMAGE:11321 EMAGE:11321 EMAGE:11321
euxassay_006592_10 euxassay_006592_11 euxassay_006592_12 euxassay_006592_13 euxassay_006592_14
EMAGE:11321 EMAGE:11321 EMAGE:11321 EMAGE:11321 EMAGE:11321
euxassay_006592_15 euxassay_006592_16 euxassay_006592_17 euxassay_006592_18 euxassay_006592_19
EMAGE:11321 EMAGE:11321
euxassay_006592_20 euxassay_006592_21

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:11321Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
11321_wholemount_strong.wlz
11321_wholemount_moderate.wlz
11321_wholemount_weak.wlz
11321_wholemount_possible.wlz
11321_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:11321_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
thymus primordium
strong strong
regionalstrong expression: see section 10 11 12 13 moderate expression: see section 07 08 09
submandibular gland primordium
strong strong
regionalstrong expression: see section 05 06 07 13 14 15 16
thyroid gland
strong strong
regionalstrong expression: see section 07 08 12
adenohypophysis
strong strong
regionalstrong expression: see section 07 08 09 10 11 12 13
vibrissa
strong strong
regionalstrong expression: see section 04 05 06 19 20 moderate expression: see section 03 21
diencephalon lateral wall ventricular layer
strong strong
regionalstrong expression: see section 08 09 10 11
telencephalon ventricular layer
strong strong
regionalstrong expression: see section 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21
hindbrain
strong strong
regionalstrong expression: see section 19
medulla oblongata basal plate ventricular layer
strong strong
regionalstrong expression: see section 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18
rest of cerebellum marginal layer
strong strong
regionalstrong expression: see section 01 02 03 04 05 06 07 10 11 12 13 14 15 16 17 18
rest of cerebellum ventricular layer
strong strong
regionalstrong expression: see section 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18
pons ventricular layer
strong strong
regionalstrong expression: see section 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18
midbrain ventricular layer
strong strong
regionalstrong expression: see section 05 06 07 08 09 10 11 12 13
spinal cord ventricular layer
strong strong
regionalstrong expression: see section 08 09 10 11 12 13 14
inner ear
strong strong
regionalstrong expression: see section 01 02 03 04 05 06 07 13 14 15 16 17 18 19 20 21
pharyngo-tympanic tube
strong strong
regionalstrong expression: see section 01 02 03 04 05 06 15 16 17 18 19 20 21
eyelid
moderate moderate
regionalmoderate expression: see section 02 03 21
neural retina
moderate moderate
regionalmoderate expression: see section 01 02 20 21
anterior naris
strong strong
regionalstrong expression: see section 10 11 12 14 15
external naris
strong strong
regionalstrong expression: see section 10 11
posterior naris
strong strong
regionalstrong expression: see section 14
nasal cavity olfactory epithelium
strong strong
regionalstrong expression: see section 08 09 10 12 13 14 15 16 17 moderate expression: see section 07
naso-lacrimal duct
strong strong
regionalstrong expression: see section 04 05 06 07 08 09 16 17 18 19 20 21
vomeronasal organ
strong strong
regionalstrong expression: see section 13
esophagus epithelium
strong strong
regionalstrong expression: see section 07 08 09 10
pharynx epithelium
strong strong
regionalstrong expression: see section 08 10
tongue epithelium
strong strong
regionalstrong expression: see section 08 09 10 11 12 13 14
stomach
strong strong
regionalstrong expression: see section 02 03 04 05 06 07 08 09
rectum
strong strong
regionalstrong expression: see section 13
midgut
strong strong
regionalstrong expression: see section 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19
lower jaw incisor
strong strong
regionalstrong expression: see section 08 09 10 13 14 15
lower jaw molar
strong strong
regionalstrong expression: see section 04 05 17 18
oral epithelium
strong strong
regionalstrong expression: see section 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19
upper jaw incisor
strong strong
regionalstrong expression: see section 08 09 10 11 14
upper jaw molar
strong strong
regionalstrong expression: see section 04 15 17 18
bladder
strong strong
regionalstrong expression: see section 11 12
renal cortex
strong strong
regionalstrong expression: see section 05 06 07 08 09 14 15 16 17 18 19
urethra of male
strong strong
regionalstrong expression: see section 12 13
larynx
strong strong
regionalstrong expression: see section 10
left lung
strong strong
regionalstrong expression: see section 03 04 05 06 07 08 09 10
right lung
strong strong
regionalstrong expression: see section 11 12 13 14 15 16 17 18 19 20 21
Annotation Validation: spatial mapping by EMAGE editor, text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7969
Entity Detected:Zfp219, zinc finger protein 219 ( MGI:1917140)
Sequence:sense strand is shown

>T7969
CTTCATTAGCAGCTTTTCTTCTTCCTCCTTCCAATCCTCAGAACCAAAGAATGTGAAGGGGGTCCATGGA
GGGTTCACGTCCCCGCATCCTGGTCGGCCACCTAGAGCCTTCCCCACCAGCCTTCGACGGCGAGCTGGAT
CTGCAGCGCTACTCCAACGGACCAGGTGTCAGCGGGACTCCAGGACCCGGCTCGCCTGGGATGGGAGCAG
TGGGTTGGTCTGAGACTCGTGCAGGCGAACGGCGTTTCCCTTGTCCTGTGTGCGGAAAGCGCTTCCGATT
CAATTCCATCTTGGCTTTGCACCTGAGAGCCCACCCGGGCGCCCAAGCCTTCCAGTGCCCACATTGCGGC
CACCGCGCAGCGCAGCGGGCTCTGCTGCGCTCACACCTCCGAACGCACCAGCCGGAGCGTCCACGCAGCC
CTGCTGCACGGCTGTTGCTGGAGTTGGAGGAACGCGCCCTGCTTCGCGAAGCCCGACTCGGGAGAGCCAG
AAGCTCAGGCGGCATGCAGTCCAGCCCTGCCGCAGAGGGCCTGGCTCGCCCTCAGGTCCCTTCCTCATCT
GCCTTCCGTTGCCCTTTCTGCAAAGGCAAGTTTCGCACCTCAGCGGAGCGGGAACGCCACCTGCATATCC
TGCACAGGCCCTGGAAGTGCAGCTTGTGCAGTTTTGGCTCCAGCCAGGAGGAGGAGTTGCTGCACCACAG
TCTGACGGCCCACGGGGCTTCCGAGCGCCCCCTGGCGGCTACATCTACGCCTGAACCCCCGCCTCCACCC
CAGCAAGAACCCAGATCTGCCCTTGAGCCTGAGCCTGAGCCTGAACCTAGGCCAGAGCCTGACCGGGAGG
CAAACCCTGCCCCAACTCCTGCACCTCCGGAGGAGCCCCCTGCGCCACCTGAATTCCGTTGCCAGGTGTG
CGGCCAGAGCTTTACACAGTCCTGGTTTCTCAAGGGTCACATGCGCAAGCACAAGGCCTCCTTTGATCAT
GCGTGCCCTGTATGTGGTCGCTGCTTCAAGGAGCCCTGGTTCCTTAAGAACCACATGAAGGTGCACACCA
GCAAGCTGGGTCCTTTGCGTGCTCCAGGCCCTGGCTCTGCACCTGCCAGGGCCCCTCAGCCTCCCGACCT
GAGCCTACTGGCATATGAGCCACTGGGCCCTGCACTCCTCCTGGCCCCAGCACCCGCTCCGGCTGAGCGC
CGAGAGCCCCCAAGCCTCTTAGGCTACCTGAGTGTACGAGCTGGGGAAGTACGACCCAATGGTGAGGGTG
CTGACCCTGGAGGTGGCCGAAGCTATGGAGGGTTCCGCCCACTGCCTTCAGCTCTTCCCAACCGGGCTCG
GCGACACCGTACAGAGGAACCAGAAGAGGAAGAAGAAGTGGTGGAGGCTGAAGAGGAGAGCTGGGCCCGA
GGCAGGTCGCTGGGCTCTCTGACTTCCCTGCACCCCAACCCAGGTGAGGGGTCAGGACAGCCTGCACCTG
CTGCGGGGACCCAGGCGAGATCCACGGCCACCCAAGAAGAAAACGGGCTGCTGGTTGGAGGGACACGATC
TGAAGCGGGCCGTGGGGCCACTGGCAAGGACTGCCCCTTCTGTGGAAAATCTTTCCGCTCGGCGCATCAC
TTAAAAGTGCATCTCCGTGTGCACACAGGTGAGCGTCCCTACAAGTGTCCACACTGCGACTATGCAGGTA
CCCAGTCGGGCTCGCTCAAGTATCACCTTCAGCGTCACCACCGAGAGCAGAGGAGCAGTGCGGGTCCTGG
GCCTCCCCCAGAACCCCCGCCACCTTCCCAGCGGGGCTCACTGCAGCCGCAGTCAGGAGCCAAGCCAACT
CAGGCCTCAGCCACCTGGGTAGAGGGCACTGCAAGTACCCGGCCTCCTTCGAGCAGCACCGGACCAGGGT
CCCGTAGGAAGCCTGCTAGCCCTGGGAGGACCCTGCGAAACGGGCGAGGTGGTGAAGCCGAACCCCTGGA
CCTGTCCCTACGGGCGGGCCCGGGAGGTGAGGCCGGGGCAGGGGGTGCCCTTCACCGCTGCCTCTTCTGT
CCCTTTGCCACTGGAGCTCCTGAGCTCATGGCCTTGCATCTGCAAGTACATCATAGCCGTCGTGCTCGGG
GCCGCCGGCAGCCCCGAGCCGACACGTCTCCAACCTATGTCCGGGCACCATCAGGAGAGACCCCTCCCAG
TCCTCCACTAGAAGAGGAGGGCAGCCCAGGGCTGTCTAGATCCGGAGAGGCAGGTCTTGGGGGGCAAGAA
CGGTAGGGAGCCCTCTTAGGAGTGATTAGTTTAGTAAGCTTGCCCCGCAGGAGCGGGGAAGTGCTAGAGG
TAGTTGGATAGAGCAGCCAGCAGGGAGCAGTGTGGGACCCGTATCCCAGCCCAAGGTGGACCAAGAGGTA
AAGTGGGCAGTGGGTGGAGGAGAGTGGGCTAGCAGCACCCACCCAGCCCAGAGGAGTCACAGTGCCTTAG
AAGTGGCAGAGGTGAGGGTCAAAGAACGGGGTCCTCGGGCTGGTAGAGGATGTGTTCCTGTTAAGGAGCC
GCTCTGCCAGTTCCTGCTGGTCCATAGGCATGAGAGTTTATTTTTGTATAAGGGGTGGGGGTGGGGGGCA
CTGTACCCTTCTAGCCCTATCAGGGGCCCTTGTAGACGTTGCTATTTTTGGTACGATTCCTGTCATCCCT
GTTGAAGAGTCATGTCCCCAATAAACAGGTGTCTTGAGGCACAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAA
Notes:The probe template was PCR amplified from IMAGE:30290129 using vector (pCMV-SPORT6.1) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:30290129 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:11320 same embryo
 EMAGE:11324 same embryo
 EMAGE:11323 same embryo
 EMAGE:11322 same embryo
 EMAGE:11319 same embryo
 EurExpress:euxassay_006592 same experiment
 MGI:4829298 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS