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EMAGE:10925

Csnk2b casein kinase 2, beta polypeptide ( MGI:88548)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:10925 EMAGE:10925 EMAGE:10925 EMAGE:10925 EMAGE:10925
"Pseudo-wholemount" of euxassay_003470. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_003470_01 euxassay_003470_02 euxassay_003470_03 euxassay_003470_04
EMAGE:10925 EMAGE:10925 EMAGE:10925 EMAGE:10925 EMAGE:10925
euxassay_003470_05 euxassay_003470_06 euxassay_003470_07 euxassay_003470_08 euxassay_003470_09
EMAGE:10925 EMAGE:10925 EMAGE:10925 EMAGE:10925 EMAGE:10925
euxassay_003470_10 euxassay_003470_11 euxassay_003470_12 euxassay_003470_13 euxassay_003470_14
EMAGE:10925 EMAGE:10925 EMAGE:10925 EMAGE:10925 EMAGE:10925
euxassay_003470_15 euxassay_003470_16 euxassay_003470_17 euxassay_003470_18 euxassay_003470_19
EMAGE:10925 EMAGE:10925 EMAGE:10925 EMAGE:10925 EMAGE:10925
euxassay_003470_20 euxassay_003470_21 euxassay_003470_22 euxassay_003470_23 euxassay_003470_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:10925Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
10925_wholemount_strong.wlz
10925_wholemount_moderate.wlz
10925_wholemount_weak.wlz
10925_wholemount_possible.wlz
10925_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:10925_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5976
Entity Detected:Csnk2b, casein kinase 2, beta polypeptide ( MGI:88548)
Sequence:sense strand is shown

>T5976
CCAGTTTCCAGTGGCCCCCCCCCTCCCTACTTCGTCTGCTGCGGCCGGGTCGGCTTTTTGCGCTGTAGTG
GTCTCTGCGGTTCCTTGGAAGCACAGCTCCCCTTCCCCGCCCCAGTCCCAGTCCCCGTCCGGCCGCGGAC
ATAAAGATGAGTAGCTCTGAGGAGGTGTCCTGGATTTCCTGGTTCTGTGGGCTCCGTGGTAATGAATTCT
TCTGTGAGGTGGATGAAGACTACATCCAGGACAAATTTAATCTTACTGGACTCAATGAGCAGGTGCCTCA
CTATCGACAAGCTCTGGACATGATCTTAGACCTGGAACCTGATGAAGAGCTGGAAGACAACCCCAACCAG
AGCGACTTGATCGAACAGGCAGCTGAGATGCTTTATGGGTTGATCCACGCCCGCTACATCCTCACCAACC
GAGGCATCGCACAAATGTTGGAAAAGTACCAGCAGGGAGACTTTGGCTACTGTCCTCGTGTATACTGTGA
GAACCAGCCAATGCTTCCTATCGGCCTTTCAGACATCCCAGGCGAGGCCATGGTGAAACTCTACTGCCCC
AAGTGCATGGACGTGTACACACCCAAGTCCTCCAGACACCACCACACGGACGGCGCATACTTCGGCACTG
GTTTCCCTCACATGCTCTTCATGGTGCATCCAGAGTACCGGCCCAAGCGACCTGCCAACCAGTTTGTACC
CAGGCTCTATGGTTTCAAGATCCATCCAATGGCTTACCAGCTGCAGCTCCAAGCCGCCAGCAACTTCAAG
AGCCCAGTCAAGACTATTCGCTGATTGCCCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTG
CTGCCACCCTTTCAGGAAGTCTATGGTTTTTAGTTTAAATTAAAGGAATTGTTACTGTGGTGGGAATATG
AAATAAAGGAAGAAAAGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3485097 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3485097 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:10927 same embryo
 EMAGE:10930 same embryo
 EMAGE:10929 same embryo
 EMAGE:10926 same embryo
 EMAGE:10928 same embryo
 EurExpress:euxassay_003470 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS