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EMAGE:11412

A2ld1 AIG2-like domain 1 ( MGI:2385008)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:11412 EMAGE:11412 EMAGE:11412 EMAGE:11412 EMAGE:11412
euxassay_003528_01 euxassay_003528_02 euxassay_003528_03 euxassay_003528_04 euxassay_003528_05
EMAGE:11412 EMAGE:11412 EMAGE:11412 EMAGE:11412 EMAGE:11412
euxassay_003528_06 euxassay_003528_07 euxassay_003528_08 euxassay_003528_09 euxassay_003528_10
EMAGE:11412 EMAGE:11412 EMAGE:11412 EMAGE:11412 EMAGE:11412
euxassay_003528_11 euxassay_003528_12 euxassay_003528_13 euxassay_003528_14 euxassay_003528_15
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euxassay_003528_16 euxassay_003528_17 euxassay_003528_18 euxassay_003528_19 euxassay_003528_20
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euxassay_003528_21 euxassay_003528_22 euxassay_003528_23 euxassay_003528_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:11412Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
11412_wholemount_strong.wlz
11412_wholemount_moderate.wlz
11412_wholemount_weak.wlz
11412_wholemount_possible.wlz
11412_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:11412_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6266
Entity Detected:A2ld1, AIG2-like domain 1 ( MGI:2385008)
Sequence:sense strand is shown

>T6266
GGGCGCGCTCCTCGTGATTCCCCTGACCACTGCAGGGACAAGTTGCTTCCTGAAGGATCCATGTGTATTG
TTCAAAACACAAGCTTAAAAAGAGTGCCTGCAGACAGATGGCCCACATCTTCGTGTATGGCACCCTGAAG
CGCGGCCAACCCAACCACAAAGTCATGCTGGACCATTCACATGGCTTAGCAGCCTTCCGAGGCCGAGGCT
GCACAGTTGAGTCCTTCCCACTGGTGATTGCAGGCGAGCACAACATACCTTGGCTGCTGTACCTACCAGG
CAAGGGCCACTGTGTGACAGGTGAGATCTACGAGGTGGACGAGCAGATGTTGCGTTTCCTGGATGACTTT
GAAGACTGCCCCAGCATGTACCAGCGCACAGCCCTGCAGGTGCAGGTGCTAGAGTGGGAGGGTGACGGTG
ACCCTGGGGACAGTGTGCAGTGCTTTGTGTACACTACAGCCACCTATGCACCCGAGTGGCTGTTTCTTCC
CTACCATGAAAGCTATGATTCTGAGGGTCCACATGGGCTACGCTACAACCCCCGGGAAAACAGATAAAGG
GCTGTGCCCCAGACGCCAACAGGATGGAGGGAACCAGATAGCTTCCTGGCATAAGCAGAGCTTTCCAAGT
TCAACTCTAAAGCATGTTGACAAAACATTTTTGTCATATACTCTAATCTGATGTGACTTAATACTGCTCT
AGTCTTAAGGAGCACCTGGACTTGCAGGTACTAGATAGGAAACACTCTAGACTGAGGTCCCTGACATGGC
AGTTACAGGATACCTGGTTCTCCTCACTGCCTTTTTTTTTTTTAATTTGCTTTGCTCTAACCTGAAGATG
GCATCTTCTGAGACTAAAAAGACTAGGCTGCAGTTGCATCTCAGAAGTCGAATCTAGAAAGAAGTGGCAG
GAAATACTGAATTGGGTTGGATCAGTGTAAAAACATCAAGGAAAGCATGTTGTACTTAAACTATGTGCTC
CATCCACCCCAACCCCACTTGCAATTTCCAAATCACACACAAACTATTAAAATGGCCATTAAAAT
Notes:The probe template was PCR amplified from IMAGE:3501534 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3501534 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:11409 same embryo
 EMAGE:11410 same embryo
 EMAGE:11413 same embryo
 EMAGE:11411 same embryo
 EMAGE:11408 same embryo
 EurExpress:euxassay_003528 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS