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EMAGE:11977

Foxp2 forkhead box P2 ( MGI:2148705)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:11977 EMAGE:11977 EMAGE:11977 EMAGE:11977 EMAGE:11977
"Pseudo-wholemount" of euxassay_010964. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_010964_01 euxassay_010964_02 euxassay_010964_03 euxassay_010964_04
EMAGE:11977 EMAGE:11977 EMAGE:11977 EMAGE:11977 EMAGE:11977
euxassay_010964_05 euxassay_010964_06 euxassay_010964_07 euxassay_010964_08 euxassay_010964_09
EMAGE:11977 EMAGE:11977 EMAGE:11977 EMAGE:11977 EMAGE:11977
euxassay_010964_10 euxassay_010964_11 euxassay_010964_12 euxassay_010964_13 euxassay_010964_14
EMAGE:11977 EMAGE:11977 EMAGE:11977 EMAGE:11977 EMAGE:11977
euxassay_010964_15 euxassay_010964_16 euxassay_010964_17 euxassay_010964_18 euxassay_010964_19
EMAGE:11977 EMAGE:11977 EMAGE:11977 EMAGE:11977
euxassay_010964_20 euxassay_010964_21 euxassay_010964_22 euxassay_010964_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:11977Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
11977_wholemount_strong.wlz
11977_wholemount_moderate.wlz
11977_wholemount_weak.wlz
11977_wholemount_possible.wlz
11977_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:11977_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Text Annotation:
StructureLevelPatternNotes
rib
strong strong
regionalstrong expression: see section 01 moderate expression: see section 02 03 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 weak expression: see section 23
humerus
moderate moderate
regionalmoderate expression: see section 05 06 07 08 21 22 23
forelimb digit 1 phalanx
strong strong
regionalstrong expression: see section 08 09 10
forelimb digit 2 phalanx
strong strong
regionalstrong expression: see section 07 08 09 10
forelimb digit 3 phalanx
strong strong
regionalstrong expression: see section 08 09 10
hand mesenchyme
strong strong
regionalstrong expression: see section 02 03 04 05 06
hindlimb digit 1 metatarsal
strong strong
regionalstrong expression: see section 03 04 05
hindlimb digit 1 phalanx
strong strong
regionalstrong expression: see section 03 04 05
hindlimb digit 2 metatarsal
strong strong
regionalstrong expression: see section 03 04 05 06
hindlimb digit 2 phalanx
strong strong
regionalstrong expression: see section 03 04 05 06
hindlimb digit 3 metatarsal
strong strong
regionalstrong expression: see section 03 04 05 06
hindlimb digit 3 phalanx
strong strong
regionalstrong expression: see section 03 04 05 06
hindlimb digit 4 metatarsal
strong strong
regionalstrong expression: see section 04 05 06
hindlimb digit 4 phalanx
strong strong
regionalstrong expression: see section 04 05 06 23
hindlimb digit 5 metatarsal
strong strong
regionalstrong expression: see section 04 05 06
hindlimb digit 5 phalanx
strong strong
regionalstrong expression: see section 04 05 06 23
femur
weak weak
regionalweak expression: see section 07 08 22
upper leg rest of mesenchyme
strong strong
regionalstrong expression: see section 01 02
adrenal cortex
weak weak
regionalweak expression: see section 09 10 11 18 19 20
diencephalon lateral wall mantle layer
strong strong
regionalstrong expression: see section 07 08 09 10 11 12 13 14 15 16 17 18
telencephalon mantle layer
strong strong
regionalstrong expression: see section 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23
telencephalon meninges
strong strong
regionalstrong expression: see section 01 02 03 moderate expression: see section 04 05 20 21 22 23
medulla oblongata floor plate
strong strong
regionalstrong expression: see section 13
medulla oblongata basal plate mantle layer
strong strong
regionalstrong expression: see section 09 10 11 12 14 15 16 17
metencephalon floor plate
strong strong
regionalstrong expression: see section 13
rest of cerebellum mantle layer
strong strong
regionalstrong expression: see section 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21
pons mantle layer
strong strong
regionalstrong expression: see section 10 11 14 15 17 18 moderate expression: see section 07 08
midbrain mantle layer
strong strong
regionalstrong expression: see section 05 06 07 08 09 10 11 12 13 14 15 16 17 18
ventral grey horn
strong strong
regionalstrong expression: see section 10 11 12 13 14 15 16
cochlea
strong strong
regionalstrong expression: see section 09 10 17 18 19 20
extrinsic ocular muscle
moderate moderate
regionalmoderate expression: see section 02 03 04 05 06 07 21 22 23
viscerocranium
moderate moderate
regionalExpression in the turbinate bone.
heart valve
moderate moderate
regionalmoderate expression: see section 13 14 15
esophagus
moderate moderate
regionalmoderate expression: see section 14 15
tongue
weak weak
regionalweak expression: see section 13 14 15 16 17 18
stomach
strong strong
regionalstrong expression: see section 02 03 04 05 06 07 08 09 10 11 moderate expression: see section 01 12
hindgut
strong strong
regionalstrong expression: see section 13 14 15 16 17 18
rectum
strong strong
regionalstrong expression: see section 14 15
midgut
strong strong
regionalstrong expression: see section 10 11 13 14 15 16 17 18 19 20 moderate expression: see section 12 21 22
bladder
moderate moderate
regionalmoderate expression: see section 15 16 weak expression: see section 13 14
renal cortex
moderate moderate
regionalmoderate expression: see section 20 21 22 weak expression: see section 08 09 10 11 12 17 18 19
urethra of male
strong strong
regionalstrong expression: see section 15
thyroid cartilage
strong strong
regionalstrong expression: see section 13 14 15 16
lung
strong strong
regionalstrong expression: see section 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23
trachea
moderate moderate
regionalmoderate expression: see section 14 weak expression: see section 15
axial skeleton
moderate moderate
regionalmoderate expression: see section 10 11 18 weak expression: see section 19 20
orbito-sphenoid
moderate moderate
regionalmoderate expression: see section 12 13 weak expression: see section 02 03 04 05 06 07 08 09 10 17 18 19 20 21 22 23
pelvic girdle skeleton
moderate moderate
regionalmoderate expression: see section 09 10 19 20 21 weak expression: see section 11 18
axial skeleton tail region
moderate moderate
regionalmoderate expression: see section 14 15 16
Annotation Validation: spatial mapping by EMAGE editor, text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T9351
Entity Detected:Foxp2, forkhead box P2 ( MGI:2148705)
Sequence:sense strand is shown

>T9351
CTGATTTTGTGTACGAGTGTCCACGGACGCCAAAACAATCACAGAGCTGCCTGATTTGTTTTAATTACCA
GCACAAAATGCCATCAGTGTGGGACGTGATCGGGCAGAGGTGTACTCACAGTAGTGTAAATACTGCTGTA
AACAGTTGCCTGATGGTGGCTTTGACAGTGAGCTAGCTTCGGAGTTTTTCCTTCTTTTTAGACTGTTTTT
CCCCCCCCGCACTGGCTTTTTGAATCTTCTTAATTTTTCATCTCTCTAACAAACTCCTATGAAGTTGAAA
CCGGGAAGTTTGCTCTAACATTTCCAGAGAAGGTATTAAGTCATGATGCAGGAATCTGCGACAGAGACAA
TAAGCAACAGTTCAATGAATCAAAATGGAATGAGCACTTTAAGCAGCCAATTAGATGCTGGCAGCAGGGA
TGGGAGATCAAGTGGTGACACCAGCTCTGAAGTAAGCACAGTGGAGCTGCTGCATCTGCAACAACAGCAG
GCTCTCCAGGCAGCAAGACAACTTTTGTTACAGCAGCAAACCAGTGGATTGAAATCTCCTAAGAGCAGTG
AGAAGCAGAGGCCACTGCAGGTGCCCGTGTCGGTGGCCATGATGACTCCCCAAGTGATCACCCCTCAGCA
GATGCAGCAGATTCTTCAGCAGCAGGTCCTGTCTCCTCAGCAGCTCCAGGCCCTCCTCCAGCAGCAGCAA
GCTGTGATGTTGCAGCAGCAACAACTACAAGAGTTTTACAAGAAACAGCAAGAACAGTTACATCTTCAGC
TTTTGCAACAGCAGCAACAGCAGCAGCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAGCAACAACAGCA
GCAGCAGCAGCAACAGCAACAGCAGCAGCAGCAACAGCAGCAGCAACAGCAACAGCATCCTGGAAAGCAA
GCAAAAGAGCAGCAGCAGCAACAGCAGCAGCAGCAGTTGGCGGCGCAGCAGCTCGTCTTCCAGCAGCAGC
TTCTCCAAATGCAGCAGCTACAGCAGCAACAACATCTGCTCAGCCTTCAGCGCCAGGGCCTCATCTCCAT
CCCACCCGGCCAAGCAGCCCTTCCTGTCCAGTCGCTGCCTCAAGCTGGCTTAAGTCCTGCTGAGATTCAG
CAACTATGGAAAGAAGTGACTGGAGTCCATAGTATGGAAGACAACGGCATCAAGCATGGAGGGCTAGACC
TCACGACTAACAATTCCTCCTCGACTACCTCCTCCACCACGTCCAAAGCATCACCACCCATCACACATCA
TTCCATAGTGAACGGACAGTCTTCAGTTCTGAATGCAAGGCGGGACAGCTCATCACATGAGGAGACTGGG
GCCTCGCACACTCTCTATGGCCATGGAGTCTGCAAGTGGCCAGGCTGTGAAAGCATATGTGAAGATTTTG
GACAGTTTTTGAAGCACCTTAACAATGAGCATGCATTGGATGACCGAAGCACTGCCCAATGTCGAGTGCA
AATGCAGGTGGTACAGCAGTTAGAAATACAGCTTTCTAAGGAACGCGAACGTCTTCAAGCGATGATGACC
CACTTGCACATGCGACCCTCAGAGCCCAAACCATCTCCCAAACCTCTAAATCTGGTGTCTAGTGTCACCA
TGTCGAAGAACATGCTGGAGACATCCCCACAGAGCTTACCTCAAACCCCTACCACACCAACGGCCCCAGT
CACCCCGATTACCCAGGGACCCTCTGTAATCACCCCAGCCAGTGTGCCCAATGTGGGAGCCATACGAAGG
CGACATTCAGACAAATACAACATCCCCATGTCATCAGAGATTGCCCCAAACTACGAATTTTATAAAAACG
CAGATGTTAGACCTCCCTTCACTTATGCAACACTCATAAGGCAGGCTATCATGGAGTCATCTGACAGGCA
GTTAACACTTAATGAAATTTACAGCTGGTTTACACGGACATTTGCTTACTTCAGGCGGAATGCCGCCACT
TGGAAGAATGCAGTGCGTCATAATCTTAGCCTGCACAAATGTTTTGTTCGAGTAGAAAATGTTAAAGGAG
CAGTGTGGACTGTGGACGAAGTCGAATACCAGAAGCGAAGGTCACAAAAGATAACAGGAAGTCCAACTTT
AGTAAAAAATATACCTACAAGTTTGGGCTATGGAGCAGCTCTAAATGCCAGTCTGCAGGCTGCCTTGGCA
GAAAGCAGCTTGCCTTTGCTAAGTAACCCTGGACTGATCAATAACGCCTCCAGTGGCCTCCTGCAGGCCG
TCCACGAAGACCTCAATGGTTCCCTGGACCACATCGACAGCAATGGGAACAGCAGTCCGGGTTGCTCACC
TCAGCCACACATACATTCAATCCATGTCAAGGAAGAACCCGTGATTGCAGAGGATGAAGACTGTCCAATG
TCATTAGTGACAACAGCCAATCACAGTCCGGAGTTAGAAGATGACAGAGAGATTGAGGAAGAGCCTTTAT
CTGAGGACCTGGAATGAGAACGAACTTGTGACACCTCAGTGTGAAGGGACATATCACTGACCTTCATAAC
CACTCCACAACCATGAATAGTTGACAAATTTTTACTGTGACTATTTATTAAGCATGGATAAAGGAGACAG
CCCTAAAGGAACTTACTAAGCCAGCCCTTTGGGATTCAGAACCAACAGGCAAATTGCTTGTTTTCTTCTC
TTTCTGTCCTTATTTTGTTTGTTTGTTTGTTTGATTTTACTTTCTTTACTTATTTTCTTTTTTTCATTTT
TTTAAAGGCAAAAAAAAAAACTGATTTTCTTGGGAAAAGAGAGAAAGAACTGTTCTTTCTATAATGGCTT
TGCCCATTTAAAAAATGTGGCTCTCAAGGGTTCATGAAATGACTGAGTATGAGGATCCATGTCCTATAGA
AAGCAACTGCGCCTCATATACTGCCAAAAATAGTGTTAGTTTCATTAATGTGAATTTTCCAGCATTCAGT
AGTCGTAATGTTAGAAACAATTGCTGGTCAAGTTCAACTTGTTGCTATTGTTTTTAATTTGCACAGGAGT
AGTATCAGAAATTAGTGTCACTGCTTGTATCTAGCTGACTTTTAAACAACAGAACATTAGTTTTTTATGT
TGGTGCCACCAACTGTAAATGACATAAGTTAGTTATTACAAAACACAGTAATTAGACTGTTGCAACCATC
TAAAACCTTAGGCTTCCAGTCTGTGCTGTTAGTGTAAAGATGTAAAGTGCAATCCTAAGCTAACATTATC
TGTGCAAGCACCATAGAAACATTTGCATATCTGCATAGATCTTACAACTGTACTCTTTACCTCCTTGTGA
TAAAGCTTTGTCTACCTGCAAACACAGTCAAAGGCTACAGCTGCAAACCAAAGCCAACTCTAACCATGGC
CAAGAGCTCAAGGACAGAAGCAGCCACATGCTTTGGTCAGCCTTCTGTAACTTCAATTAGTACAAAGGAA
CCTTTTCCATGAACTACCTGCTGTTTTCTGATGACCTCTGGGATCTTTTCATTTAGCCCTAAACAAAGAA
ACGAATATGACAAAACAAAAACAAAAAAACAACCCACAACTAAGAGTTCATTCAGTCACAGAGTAATCTT
CTGAGGCCAAAAGTCCATCTAAATGCAATGAAGATTTGCTTTCATTAAAGACAGAGGTGAGGACAAAATC
TGCAGTGGAAGTTATGACACTCTAGAAAGCAACAAATGTGGATCACTGACCAAAACAATTATGTACTTGA
TGCAAATGCAGATTGCGTATTGTTATATATATAGTACATTGCGTTTTTGTTTTCCCCATCTTTTTGGTGG
TGAGTTCATGTTGTTAGAAGTACATGTCTTGTATGGTCTTAATCTCTGTTGTGTACTATTTTTTTATAGT
CTTAAGTTATAATAAAAAAAAACAAAAAACAAAAAACAAAAAGTAGGAACCAAACATAAAAGGTCTAGTA
AAGCCAAAAATTAATTTCCTATTGATTTTAAAGTGATCTAGCTGAGTTTTTACACTGAAAGCAAAGATTA
TAGCAAGTGTAGCCCATGGTATTTATTTTCAGTCAAACCAAAGTTACATATAATTCTGCCTCTGCTTATA
CGGGATATGAACACTAACACACTCCCTTCAAAGACTTGTGCAGGCCAAATTGTTGGAATGCTGATTTTCT
TGACAACTCTAAACCCCAAAACTATGATAAGACGTTATGGTGTAGTTGAAGATAGCATAGTCAGATGTTT
GCTTAAAACCTAGAGACTTTATGTGTTGCTTTTCATGTGCTGTGCCAAGTCTTGATAATACTTTTTCCCC
CAACCAAGGGACCTCATAACCTGATTATGGTTATTGCTTTACAAACAGTTTTGACAGAAGGTGGCTGCTA
GAGCTTAACAAATGTCCCGGTTCCATGTGATGGAGCCGGTTCTTGCAAACTAAGCTCAATGTTTATCCTT
TGCTGAAGTCAGCAAATAGAGTTAGAGAGATACCCAGTCATCTATCACACCAAATAAAAGGACATAACGG
CTTTCAAAGGGTTTTCCCACTTACCCAAAAGGCTTTCTGAAAGCTTCTACCTCTGCAAAAAAAAAAAAAG
AAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6851153 using vector (pYX-Asc) specific primers. Forward Primer - name:RZPD T3, sequence:ATTAACCCTCACTAAAGGGA; Reverse Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6851153 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:11976 same embryo
 EMAGE:11979 same embryo
 EMAGE:11978 same embryo
 EMAGE:11975 same embryo
 EurExpress:euxassay_010964 same experiment
 MGI:4824916 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS