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EMAGE:12211

Phb prohibitin ( MGI:97572)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:12211 EMAGE:12211 EMAGE:12211 EMAGE:12211 EMAGE:12211
"Pseudo-wholemount" of euxassay_008329. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_008329_01 euxassay_008329_02 euxassay_008329_03 euxassay_008329_04
EMAGE:12211 EMAGE:12211 EMAGE:12211 EMAGE:12211 EMAGE:12211
euxassay_008329_05 euxassay_008329_06 euxassay_008329_07 euxassay_008329_08 euxassay_008329_09
EMAGE:12211 EMAGE:12211 EMAGE:12211 EMAGE:12211 EMAGE:12211
euxassay_008329_10 euxassay_008329_11 euxassay_008329_12 euxassay_008329_13 euxassay_008329_14
EMAGE:12211 EMAGE:12211 EMAGE:12211 EMAGE:12211 EMAGE:12211
euxassay_008329_15 euxassay_008329_16 euxassay_008329_17 euxassay_008329_18 euxassay_008329_19
EMAGE:12211 EMAGE:12211 EMAGE:12211 EMAGE:12211 EMAGE:12211
euxassay_008329_20 euxassay_008329_21 euxassay_008329_22 euxassay_008329_23 euxassay_008329_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:12211Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
12211_wholemount_strong.wlz
12211_wholemount_moderate.wlz
12211_wholemount_weak.wlz
12211_wholemount_possible.wlz
12211_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:12211_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8584
Entity Detected:Phb, prohibitin ( MGI:97572)
Sequence:sense strand is shown

>T8584
GAAAGCAGGTGTGAGTGGAAGCAACAGAAGGAGTCATGGCTGCCAAAGTGTTTGAGTCCATTGGAAAGTT
CGGCCTGGCGTTGGCAGTTGCAGGAGGCGTGGTGAACTCTGCTTTGTATAATGTGGATGCTGGACACAGA
GCTGTCATCTTTGACCGATTCCGTGGCGTACAGGACATTGTGGTCGGGGAAGGGACTCATTTCCTCATCC
CTTGGGTACAGAAACCAATTATCTTTGACTGCCGCTCTCGACCACGGAACGTACCAGTCATCACTGGTAG
CAAAGACTTGCAGAACGTCAATATCACACTGCGAATCCTCTTCCGGCCGGTGGCCAGCCAGCTTCCTCGT
ATCTACACCAGCATTGGCGAGGACTATGATGAGCGGGTCCTGCCTTCTATCACCACAGAGATCCTCAAGT
CGGTGGTGGCTCGATTCGATGCTGGAGAATTGATTACCCAGCGAGAGCTGGTCTCCAGGCAGGTGAGCGA
TGACCTCACAGAGCGAGCGGCAACATTTGGGCTTATCCTGGATGACGTGTCCCTGACACATCTGACCTTC
GGGAAGGAGTTCACAGAGGCAGTAGAAGCCAAACAGGTGGCTCAGCAGGAAGCGGAGAGAGCCAGATTTG
TGGTGGAAAAGGCTGAGCAGCAGAAGAAGGCAGCCATCATCTCTGCTGAGGGTGACTCCAAGGCCGCTGA
GCTGATCGCCAACTCGCTGGCCACGGCAGGCGACGGCCTGATCGAGCTGCGGAAGCTGGAGGCCGCCGAG
GACATTGCGTACCAGCTCTCCCGCTCTCGGAACATCACCTACCTGCCAGCGGGCCAGTCCGTGCTTCTCC
AGCTTCCCCAGTGAGGCCAGCCGGGCCACGGCCTCCATCATGCTGAATGACGCCTTCCTTCTGCCCCACC
CCAGAAAATCACTGTGAAATTTCATGATTGGCTTAAAGTGAAGGAAATAAAGGTAAAATCACTTCAGATC
TCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5715690 using vector (pYX-Asc) specific primers. Forward Primer - name:RZPD T3, sequence:ATTAACCCTCACTAAAGGGA; Reverse Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5715690 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:12209 same embryo
 EMAGE:12213 same embryo
 EMAGE:12214 same embryo
 EMAGE:12210 same embryo
 EMAGE:12212 same embryo
 EurExpress:euxassay_008329 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS